Scheffersomyces stipitis: PICST_72239
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Entry
PICST_72239 CDS
T01023
Symbol
CTR9
Name
(RefSeq) protein required for normal CLN1 and CLN2 G1 cyclin expression
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_72239 (CTR9)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PICST_72239 (CTR9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_12
TPR_19
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_17
TPR_10
ANAPC3
TPR_3
Motif
Other DBs
NCBI-GeneID:
4839733
NCBI-ProteinID:
XP_001384981
JGI:
72239
UniProt:
A3LWD9
LinkDB
All DBs
Position
5:1516491..1520702
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AA seq
1120 aa
AA seq
DB search
MAETVDVSYYLGAQAAEIGAILDVPLSNGQIVSINLVDELPDDPVELESFLEGENCSKKY
WISVASAYAQLGKLEEALHIIQTALDKNPAHFSDEDNKSFHSFLVWLYFKFVSHGIDKEN
YLKKAGSEINSLAQRIRADNSTSTTNSTSNLLSQAVLLLFNGRDDEALDIFDKILRIDQN
NCFALLGKARAVLNKTKNYAAALKLYQQVLILNPVIKPDPRIGIGLCFWFLKDDRMAVQA
WNRALEIDPTNLKAKVLLNLANFQKTFINSLSDDEFLENYKSCLSQLASNHKESPSESSI
LLALASYYFSKESYDVVSSIVAKVVKNMTGDENLTRFNSFSKVSKYQSNILSECAAWLGR
IEFVKANFTPASKYFQEAIKLNDANLLAKIGLGQSQYNRGSIEEAVMTYESILRSNVKCL
EANYALGLLYAKQKSRKKQQAAIQILERYIRLSNNLGLSASHKDEDGSEFLNKEPITLNA
YLVLSKLYETTDINQSLNYLNRAIESRKQIGKDVPLEVYNNIGVFNFMKQNYDDAAAHFQ
TALDIVKNTDQFVSADGDVMVDLPTDLKISLTYNLARSKEISNESEAIDIYESLLAECPN
YFSAKIRILFLNCVTSHKLSKEDIKVEIDQLLAVNASDLEIRSFYGWFVKNFGKKLGLAP
DADTNHQKDTLVEYDSHDCYALISLANIYCIMARDVKSGSEDKKKKYYVRAVELFAKVLS
VDPKNVYAAQGLAIAYIENKDSVKGLEILRKIRDSLNDISIYLNLGHVLVESKSYGKGIE
NYELALGRFTDGKDSRILSFLGRAWYLRASAEKNLNFFKKAIEYTELALDCSTGPGSSIR
FNLAYLHFQIAELITKQPVGQRKIDEIEAAIAGLESGVAILNELSSEDEKHPPYPKAELK
ARANLGSTTLLNRLNGCLEETKNSIAAIEEKIEVAKKLRKEEEEEKERLENERLAAVKAK
EEELAKERAILQEQAQQWAEEARMNIVVEDDEDEKLFDEESNKDKKEKKPKKVTKGAKKR
SRKKAVIDDSEEEEEEASATDSDVEASSPKKRKTEESKPSSKRGGKKSSLSSEFIADSDE
ELDDDLFNENGEEEEEAEASGAEEENGEVNGQAAVKDDDE
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgttgacgtttcctattatctcggggcacaggcggcggagattggagcc
attttggatgttccattatccaacgggcagattgtctcgatcaacttagtggatgagctt
ccagacgaccctgtagagttggaatcgtttttagaaggagagaactgttcgaaaaagtac
tggatcagcgtagctagtgcctatgcacaattaggaaagctagaagaagcacttcatatt
atccaaacggcgttggacaaaaatcctgctcatttttctgatgaagacaacaagctgttc
cattctttcttggtttggctctattttaagttcgtttctcatgggatcgacaaggaaaac
tacttgaagaaagctggctctgaaatcaacagtcttgctcaacgtatccgagctgataac
tcaacgtccacaaccaattctacttcgaatttgttgtctcaagctgtattgcttttgttc
aacggcagagatgatgaagcgttggatatctttgacaagattttgcgcattgatcagaat
aactgttttgcacttttaggtaaagctcgtgccgtcttaaacaaaaccaagaactatgcg
gctgctttgaagttgtaccagcaggtcctcatcttgaatcctgtgataaagcccgatccc
agaatcggcattgggttatgtttttggttcttgaaggatgacagaatggcggttcaggcc
tggaacagagccttagagattgatccgaccaatttgaaagccaaggtgttgttgaacttg
gccaacttccaaaagacgttcatcaactctttgagtgacgatgagttcttggaaaactac
aagtcgtgtttatcacagttggctagtaaccataaagaaagcccttcagaatcttccatt
cttttagcattggcatcgtactacttctccaaagagagttacgatgtagttagcagtata
gtagctaaagtagtcaagaacatgactggggacgagaacttgactcgtttcaatagcttc
agtaaggtctcgaagtaccagtccaatatcttgtccgagtgtgctgcctggttgggtcgt
attgaattcgtcaaagcgaactttacgcccgcctccaagtacttccaggaagctatcaag
ttgaacgacgccaatttgcttgccaagatcgggttgggtcagtctcaatacaatcgtggc
tctattgaagaggctgtgatgacatacgaatcaattttgagaagtaacgtcaagtgttta
gaagctaactacgcattgggcttactctatgcaaagcagaaatcaagaaagaagcaacag
gcagccattcagatattggaaaggtacattagattgtccaacaacttgggcttatctgcc
agtcataaagatgaagacggttcggagttcttgaacaaggaaccaattacattgaatgcg
tatttggtgttaagcaagctttatgagacaaccgatatcaaccagtccttaaactacttg
aatagggcaatagagtcaagaaagcagattggcaaggatgttcctttggaggtatacaac
aacattggggtgttcaatttcatgaaacagaactacgacgatgctgccgctcatttccaa
acagctcttgatatcgtcaagaacactgaccagtttgtcagtgctgacggagatgtcatg
gtagacttgccaaccgatttgaaaatctcgttgacttacaatttggccagatccaaggag
atatcgaatgagtctgaggctatagacatctatgagctgttgttggcagagtgtcctaac
tacttctcggcaaagatcagaattcttttcttgaactgtgtcacttctcacaagctcagc
aaggaagatattaaggtcgagatcgaccagttgttggctgtgaacgcctcagacttggag
attagatccttctatggctggtttgtcaagaactttggcaagaagttgggattagcacca
gatgctgatacaaaccaccaaaaggatacgttagtggaatatgattcgcatgactgctat
gctttgatatcgctagccaatatctactgtatcatggccagggatgtgaaatcaggcctg
gaagacaagaagaagaagtactatgtaagagccgtagagttgtttgccaaagtgctatct
gtggatccaaagaatgtctatgctgcacagggtttggctatagcatacattgagaacaaa
gattccgttaaaggattggagatcttgagaaaaatcagagattcattgaacgacatctcc
atttatttgaacttgggccatgtattggtagagtccaaactgtatggcaaaggtatcgag
aattatgagcttgccttgggcagattcacagacggaaaggattcgcgtattctttccttc
ttgggaagagcatggtacttgagagccagtgctgaaaagaacttgaacttcttcaagaaa
gccatagagtataccgagctagccttggactgttctactgggcccggttcttctattaga
ttcaacttggcatatcttcatttccagatagctgaattgatcaccaaacagcctgtgggc
caaagaaagatagatgagatcgaggctgctattgctggtttggaatcaggagtagcaatc
ttgaacgagttgtcttctgaagacgaaaagcacccaccttatcctaaggctgagttgaaa
gccagagccaacttgggatcgacaacgttgttgaacagattgaacggatgtcttgaagaa
acgaagaacagcattgctgcgatagaagagaagattgaagtcgccaagaagttgagaaag
gaagaagaagaggaaaaagagagacttgaaaacgaaagacttgcagccgttaaggccaag
gaagaagagcttgctaaggaaagagcaatcttgcaagaacaggctcagcaatgggccgaa
gaagccagaatgaatattgtagtagaagatgacgaagacgagaaactctttgacgaagag
tccaacaaggacaagaaggagaagaagcccaagaaggtcacaaagggtgccaaaaagaga
agcagaaagaaggctgttattgacgacagtgaagaagaagaggaagaagcctctgctact
gactcggacgttgaagccagctctcccaagaagaggaaaacagaagaatcaaaaccttct
tcgaagagaggaggaaagaagagctctctttcttctgaattcattgctgacagcgacgaa
gagttggatgatgatttgtttaacgagaatggtgaggaggaagaagaggctgaagcatct
ggtgctgaggaagaaaacggagaagtcaacggccaggctgctgtcaaagatgatgatgaa
tag
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