Scheffersomyces stipitis: PICST_72775
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Entry
PICST_72775 CDS
T01023
Symbol
SED4
Name
(RefSeq) protein involved in vesicle formation at the endoplasmic reticulum
KO
K14003
prolactin regulatory element-binding protein
Organism
pic
Scheffersomyces stipitis
Pathway
pic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PICST_72775 (SED4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_72775 (SED4)
Membrane trafficking [BR:
pic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
PICST_72775 (SED4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_CDC20-Fz
WDR55
EIF3I
NBCH_WD40
eIF2A
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
4839143
NCBI-ProteinID:
XP_001384733
JGI:
72775
UniProt:
A3LV37
LinkDB
All DBs
Position
5:392281..393441
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AA seq
387 aa
AA seq
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MSLKETASIDVGFPIMGAKFFNNKTIIVAGGGGEGNNGIPNKITAIKCSFKVTDAKRRLQ
RFREITLPANEDSPQCLDTAPIVDDEENKFSIFVGCNQSSQLIKSMSINNNLRKYVYTAE
EHLRFVDAAQLEEEIKGDANDYPKTIRLSPKNGVGCLMTSTVPSTIYIFNPDLLELKFKF
RPTPDAEIKDFALSPNDDGKTLCYVTSSGIETISTSTSQPIASSAKNQKVDAELKKLILS
KVRFIDDENVIVAASIRGGSGAVLLKYNLADQKITNKVVVSKKFKNIVAFDLSLSQNLVA
VAGNDVTLTLIRLSDLSVIKTYPKLHAFAITSVTFSPNGSKLATGSAASTLHVFRIPQNF
SRGKSTLGSLIQYLFTVLVVAAVAVLL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaaggaaactgcttccatcgacgtgggcttccccatcatgggagccaagttt
ttcaacaacaaaaccattatagtggctggtggaggaggagagggaaacaatggtattccc
aacaagatcactgccataaaatgcctgttcaaagtgaccgacgccaaacgccgcttgcag
agattccgtgaaatcacattgccagccaatgaagactcgccccaatgtttggatacggcg
ccaattgtcgacgatgaagagaataagttctctatctttgtaggatgtaaccagctgtca
caactcatcaagtccatgagcatcaacaacaacttgagaaagtatgtgtataccgcagaa
gaacacttacgatttgtagacgctgctcagcttgaagaggaaatcaagggcgacgccaac
gattatcccaaaactatcagattatcgcctaaaaatggcgttggatgtttaatgacttct
acagtgccttcgactatctatattttcaacccagacttgttggaattgaagttcaaattt
agacctacgcctgatgccgaaatcaaagactttgccttaagtcccaacgacgatggaaag
acactttgttacgtcacttctagtggaattgagactatctctacttctacttctcaaccc
attgcttcttcggccaaaaaccaaaaggtggatgctgagttgaaaaagctcattttgtcc
aaagtccgtttcatagacgacgaaaacgttatcgttgctgccagtattcgcggaggctct
ggtgcagtacttcttaagtataatctcgcagaccagaagatcaccaacaaggtcgtagtg
tcaaaaaagttcaaaaacattgtagcatttgatctttcgcttctgcagaacttggtggca
gtagctggcaatgacgttaccttgacgttgatacgactttcggatctttctgttattaag
acctaccctaaattgcatgcctttgccatcaccagtgtcacgttctcgcccaatggatcc
aaactcgccactggcagtgcagccagtactcttcacgtgtttagaatcccccaaaacttc
agcaggggtaaatcgacacttggttccttgatccagtacctctttacggtcttggttgta
gctgctgtagctgttctttta
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