Scheffersomyces stipitis: PICST_74636
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Entry
PICST_74636 CDS
T01023
Symbol
TIF1
Name
(RefSeq) Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
KO
K03257
translation initiation factor 4A
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_74636 (TIF1)
03012 Translation factors [BR:
pic03012
]
PICST_74636 (TIF1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_74636 (TIF1)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PICST_74636 (TIF1)
mRNA cycle factors
Stress granule specific factors
PICST_74636 (TIF1)
Translation factors [BR:
pic03012
]
Eukaryotic type
Initiation factors
eIF-4
PICST_74636 (TIF1)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PICST_74636 (TIF1)
Exosomal proteins of bladder cancer cells
PICST_74636 (TIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_30
AAA_22
CMS1
UvrD-helicase
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
4851033
NCBI-ProteinID:
XP_001387376
JGI:
74636
UniProt:
A3GFI4
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All DBs
Position
1:775146..776629
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AA seq
397 aa
AA seq
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MSSDGIKEIDSDLIETNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEG
RDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNV
TVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSS
GFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFY
INVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAE
RDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKG
VAINFVTERDVGMMREIEQFYSTQIEEMPADIGALFN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacggtattaaggaaattgactccgatttgatcgaaaccaactacgacaat
gtcgtgtacaagttcgatgacttgaacttgaagcctaacatcgtgagaggtatctttggt
tacggttacgaaaccccatcggccattcaacaaagagctatcttgccaatcactgaaggt
cgtgatgtccttgcccaggcccaatccggtaccggtaagactgccactttcaccatctct
gccttgcaaagaattgatgaaaacgaaaagagcacccaagccttgatcttggctccaacc
agagaattggctcttcaaatcaagaacgtcattacttccattggtttgtacttgaacgtg
actgtccatgcctccattggtggtacctctatgcaagacgatatcgaagccttcagatca
ggtgtccaagtcgttgttggtactccaggtagagttttcgacatgattgaaagaagatac
ttcaagaccgaaaaggtcaagatgttcattatggatgaagccgatgaaatgttatcgtct
ggtttcaaggaacaaatctacaacattttccgtttgttgccagaaactacccaagtcgtc
ttgttgtctgccactatgcctcaagatgtgttggaagtcaccaccaagttcatgaacaac
cctgtcagaatcttggtcaagaaggacgaattgaccttggaaggtatcaagcagttctac
atcaacgtcgaattggaagactacaagttcgactgtttgtgtgacttgtacgactccatc
tccgtcacccaggccgttatcttctgtaacaccagatctaaggtcgaattcttgaccacc
aagttgaaggctgaaaacttcactgtctctgccatccacgccgacttgccccaagccgaa
agagacacaatcatgaaggaattcagatctggttcctcccgtatcttgattgctaccgac
ttgttggctagaggtatcgatgtccaacaggtctctttggtcatcaactacgacttgcca
tctaacaaggaaaactacatccacagaatcggtagaggtggtcgtttcggtagaaagggt
gtagccatcaactttgtcaccgaaagagacgttggtatgatgagagaaatcgaacaattc
tactccactcaaatcgaagaaatgcctgctgatatcggtgctttgtttaactaa
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