Scheffersomyces stipitis: PICST_76038
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Entry
PICST_76038 CDS
T01023
Symbol
RCF5
Name
(RefSeq) DNA replicationn factor C
KO
K10756
replication factor C subunit 3/5
Organism
pic
Scheffersomyces stipitis
Pathway
pic03030
DNA replication
pic03410
Base excision repair
pic03420
Nucleotide excision repair
pic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PICST_76038 (RCF5)
03410 Base excision repair
PICST_76038 (RCF5)
03420 Nucleotide excision repair
PICST_76038 (RCF5)
03430 Mismatch repair
PICST_76038 (RCF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pic03032
]
PICST_76038 (RCF5)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_76038 (RCF5)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_76038 (RCF5)
DNA replication proteins [BR:
pic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PICST_76038 (RCF5)
DNA Replication Termination Factors
ELG1-RFC complex
PICST_76038 (RCF5)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PICST_76038 (RCF5)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PICST_76038 (RCF5)
Check point factors
HRAD17(Rad24)-RFC complex
PICST_76038 (RCF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_24
AAA_16
RuvB_N
Motif
Other DBs
NCBI-GeneID:
4837139
NCBI-ProteinID:
XP_001382764
JGI:
76038
UniProt:
A3LMS2
LinkDB
All DBs
Position
2:complement(27941..29202)
Genome browser
AA seq
363 aa
AA seq
DB search
MSLWVDKYRPKTLDQLSFHDSISQNLRALARSGDFPHLLIYGPSGAGKKTRIYATLNEIF
GSQVEKLKIDVKTFVTSSNRKMEFNVLSSAYHLEITPSDMGNNDRVVISDLLKDVASTEQ
VDFSHQNTSKTKHRFKVVVINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIPP
IKSRTLLVRIPSPSTTAISSILGQVAKKEGIKFSSSNELDIQKYLVTLADTANRNLRKAL
LSFETVAMQNETIQLDNKTLTIVTLDWEEIIKNMSNTIRINRNVATLASVRVVLYELLAH
CIPPRIILKTLMFNLIKNFKDDAVISQLVDLGSVFDERLSLGSKSIFHLEGFVAKSMVVI
DSN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtgggtggacaagtatagaccaaagaccttggaccaattgtcatttcatgat
tctatttcgcagaacttgagggctttggccagatctggggattttcctcatttgttgata
tatggacccagtggagctgggaaaaagacaagaatatacgcgactttgaacgaaatattt
ggttctcaggtggagaaattgaagatcgacgtcaagacttttgtaacttcttccaacaga
aagatggaattcaatgtattgagttcggcctatcacttggagatcaccccttctgatatg
ggcaacaacgatcgtgtggtgatcctggatttattaaaggatgtcgcttctaccgaacag
gttgatttcagccaccagaatacttcaaagaccaagcatagatttaaagttgtggtgata
aatgaggctgattcacttagtagagatgcccaggctgccttaagaagaacaatggaaaag
tactcgtctaacataagattgatacttgtatgtaattcgatctccaacatcattcctccc
ataaaatcgagaacgttattggtcagaatacccagtcccagcactacagcaatttccctg
atattggggcaggtggccaagaaggaaggaatcaaattcagctcgtccaacgaacttgat
attcaaaagtatttggtaactcttgctgatacagctaatcgaaacttgagaaaagcactt
ttaagttttgagaccgtcgccatgcaaaacgaaactatacagcttgacaacaaaacgttg
acgattgtcaccttggactgggaagaaatcatcaagaacatgtccaacactattagaatc
aaccgtaacgtcgctaccttggccagtgttcgagtggttttgtacgaattacttgctcat
tgtatccctccaagaataatattgaagacattaatgttcaatttgatcaagaatttcaag
gacgacgctgtcattagccagttggttgatttaggatctgtgtttgacgaaagattgagt
cttgggctgaaaagcatctttcacttggaagggtttgtggctaaatcgatggtggtgatc
gacagcaactaa
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