Scheffersomyces stipitis: PICST_76301
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Entry
PICST_76301 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14309
nuclear pore complex protein Nup93
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_76301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_76301
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_76301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
PCRF
Motif
Other DBs
NCBI-GeneID:
4836683
NCBI-ProteinID:
XP_001382809
JGI:
76301
UniProt:
A3LN15
LinkDB
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Position
2:complement(228364..231382)
Genome browser
AA seq
984 aa
AA seq
DB search
MSLFGQPTRTSANSGPFGGTFGSGTGASATQNQSTLGSSSGASSGKLSGFGTVSDKSGTS
MGGTLPTAVNSSNSSKLLKDLLESAHNLPKSDNHQLGSVHLTLRELQRKSEKLRKLEDSG
KKDVNFTKAHYLLASSGISAEEIESELNNINLPASTTTSGSSVISVNSGAGGVSVGASSS
YSNIENYLNAKKDENILNTIEQSLNLASKDFDNFISSNISIDWKVRRDELRKSIGLKSSG
ENSQEALKKSITWNKSVPGAYNILTPLKTANGSNVSTLKQLPREKFENHAKIIYQLNEAR
LENRNLPLSLNFSELNKLQNDLKSRQIADVWKNLIDLTNEKFTKTSQEQKFYNLSPSKLS
RAVINNSKNQLESEFFKYMEELYLKDSKKEPEYLPPTNLNKISYFINRVILKNDSDLLSK
TLCVNGTPIWALIFYLLRSGLYETALELVTKNQDLFNKFDMNFPIYLNKYVSSEDHVLPS
GLNEKLHSEFNQQFQFIINDVDSSNNINFDPYKYSVYKIVGKCDLSKKSLPQEINLSIED
WLWFHLSIINEHQLNNESNLIFENYSLVNLQNRIISLGPKNFNTSSNNPLYLKTLMLVGL
YELAVQYTYDFINECDAVHLAIGLNYYGLLKVASYNNKDDLLIVRSNDYEINFSRLLGSY
TRSFKISDPKVACQYLILIAMSKGGNSKEEIAKCHEALRELILISREFVMLLGDINQQNG
TKIPGVLERQRSLIKLEDLKEFYSQIIELSAIKCEDEGRIFDALLLYQLCQEFDTVVSLI
NKLLAEILSSTELDKPIIQYGNYEVQAGGVVESKRADDTIDNNVILFARHIIKIFDTNSF
ILEQIDPQRKESCDLLLHIIDIRGLFIKKDFQQVLIEIKKLALIPFGQDDDLIIIRKASE
LIQNNHLDDNLIKVIPSLLIMIMASISQANYAILTKRYQALGNEREELASLKKQAKNCMI
YAGMVQYKMPRETYSLLVNLESSL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtttggacaaccaacacgtacttctgccaattctggaccgtttggcggtact
tttggctccggaacaggagcctctgctacacagaaccaaagcactttaggatcatcttct
ggagcttccagtggtaaactctcaggttttggcacagtttccgacaaaagtggcacaagt
atggggggaacacttccaacagcagttaactcgtcgaattcgtccaagttgttgaaagat
ttgttagaatcagcgcataatttgcccaagtcggataaccatcagttgggttctgttcat
ttaactcttcgagaattgcagagaaaatcagaaaagttgcgtaaactcgaagattccggc
aagaaggatgtgaacttcacgaaagcacattatttattggcgtccagcggtatcagtgct
gaagaaatcgagctggagttgaacaatattaacttgccagcatctacgacaacttctggg
tcttctgttatttctgtgaattctggagctggcggagtttctgtgggtgcatcgtcttcg
tattcaaatatcgaaaattatctcaatgcgaaaaaggatgagaacattttgaacactata
gagcagctgttgaacttggcttccaaggactttgacaacttcatcagttccaacatttcc
atcgattggaaagttagaagagatgagctccgtaaatctattggcttgaaatccagtggt
gagaactctcaagaagcgttgaaaaaatccatcacctggaacaagtctgttccaggagca
tataatatcttaacgcctttgaagactgccaacggttccaatgtctcaactttgaaacag
ttgcctcgcgaaaaatttgagaaccacgctaagatcatataccagttgaacgaagcaaga
ttggagaacaggaatttgccgttgtcgttgaacttttctgagttaaacaagctccagaac
gacttgaaatccagacaaatagcagacgtgtggaagaacttgatcgacttaaccaatgag
aaattcactaaaaccagtcaagaacagaagttctacaacttgtcgcctctgaagttgagc
agagctgtcatcaacaacagtaagaaccagttggagtctgagttcttcaaatacatggaa
gaactatacttgaaggacagtaagaaggagccagagtatcttcctcctaccaacttgaac
aaaatctcgtatttcatcaacagagtgattttgaagaatgactccgacctcttgagtaaa
actttgtgtgtaaatggaactccgatctgggctctcatcttttatttactcagaagtggt
ctctacgaaacagctttggaactcgttacaaagaaccaggacttgttcaacaagttcgat
atgaacttccccatatatctcaacaagtatgtctctagtgaagaccatgttcttcccagt
gggttgaacgaaaaattgcattctgaattcaatcaacagttccagttcataatcaatgat
gtggatagctccaacaacatcaactttgatccctataaatattcagtctacaagatagtt
ggtaagtgtgatttgagcaagaaatcgttacctcaggagataaacttgagtatagaagac
tggttgtggttccatttgtcgatcatcaatgagcatcaattgaacaatgaatcaaatttg
attttcgagaactacagcttggtcaatttgcagaacagaatcatctctcttggtccaaag
aacttcaacacttcatctaacaacccgttgtatcttaagacgttgatgttggttggtttg
tacgagttggcagttcagtacacatacgacttcatcaacgaatgtgatgccgttcatttg
gctataggtttgaactactatggcttgcttaaagttgcaagttataataacaaggacgat
ctcttgattgtccgctctaatgactacgaaatcaacttcagcagactattgggttcgtac
acaagaagtttcaagattagcgatccaaaggttgcctgtcagtacttgatattgatagcg
atgtctaaaggaggaaactcgaaggaggaaatcgccaagtgtcacgaagcattgagagag
ttgattttgatttctcgtgagtttgtcatgttgcttggagatatcaaccagcagaacggt
accaagattcctggagtgttggaaagacagagatcattaataaaattggaagatcttaag
gaattctacctgcaaatcatagagttaagtgccataaaatgtgaagatgaaggcagaata
ttcgatgccttattgttgtatcaattgtgtcaagagtttgatacagttgtctcgttgatc
aacaagcttctcgctgaaattttgtcatctacggaattagacaaacctatcatacaatac
ggcaactacgaagttcaagctggaggagttgtagaaagtaaaagagccgacgacaccatt
gataacaacgtaatcctctttgctcgtcatattataaagatttttgacacgaacagcttc
attttggagcagatagacccacaaagaaaagaaagctgtgacttgttgttgcatataata
gacatcagaggtttgttcatcaagaaggatttccagcaagtgttgatagaaatcaagaag
cttgctttgattccatttggccaggacgacgacttgatcataatcagaaaggctagtgag
ttaatacagaataaccatttggacgacaacttgatcaaggtgattccatcgttattgatc
atgattatggccagtatctcacaagctaactacgcgattttgactaagaggtaccaagct
cttggaaacgagagggaagagttggccagcttgaagaagcaagccaaaaattgcatgatc
tacgccggcatggtccagtataagatgcctagagaaacatacagcttacttgtcaatttg
gagtcgctgttgtaa
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