KEGG   Scheffersomyces stipitis: PICST_77577
Entry
PICST_77577       CDS       T01023                                 
Name
(RefSeq) nuclear pore protein
  KO
K14298  mRNA export factor
Organism
pic  Scheffersomyces stipitis
Pathway
pic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PICST_77577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_77577
   03036 Chromosome and associated proteins [BR:pic03036]
    PICST_77577
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PICST_77577
Chromosome and associated proteins [BR:pic03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    PICST_77577
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 eIF2A Beta-prop_DCAF12 WD40_like Beta-prop_IFT122_2nd CNH
Other DBs
NCBI-GeneID: 4838407
NCBI-ProteinID: XP_001384071
JGI: 77577
UniProt: A3LTB4
LinkDB
Position
4:571456..572595
AA seq 365 aa
MSFLNSASPASTTTGPGSVINDITVNNPPDDSITDLSFSPQQDLLAAASWDRKVRIYEID
SNSGNNQGRALFEHEAPVFSVAWTYDGTKVVSGGADKQVKLFDLQTQQSQQIGAHDAPVR
AVRYVECGPSNTPAVVSGSWDKTLKYWDMRSPQPITTIQLPDRVYTMDSSQKLLVVGCAE
RQIVVIDLNQPQQIFKNSLSPLKWQTRAISCYPQGNGFAVGSIEGRCGIQYINEQDQTKQ
GFAFKCHRKMGSNTTTSTIRSVSSTSQAYPVNAISFHPVYGTFSTAGSDGTFSFWDKDAR
QRLKSFPELNGSITATAFNKNGSIFAYALGYDWSQGYMGNRPDYPVQIKLHGTKDDEVKQ
KKKRI
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtcgtttctcaacagtgcctccccggcctccacgacaactggaccagggctggtgatc
aacgatatcactgtaaacaatcctccagatgactcgataacagacttgtcattttcaccg
caacaagacttacttgctgcggcttcttgggacaggaaggttcggatctacgagattgac
tccaactccggaaacaaccagggccgagcccttttcgaacacgaagcacctgtcttctct
gttgcatggacctacgatggtaccaaagtagtgagtggcggtgctgacaagcaagtgaag
ctttttgatcttcaaactcagcaatcgcaacaaattggtgctcacgatgctcccgtaaga
gcagttcgttatgtagaatgtggtccttccaatacacctgcggtagtgtcgggctcttgg
gacaagactctcaagtactgggacatgagatcgccacagccaattacaaccatacagctt
ccagaccgtgtctacactatggattccagtcagaagttgttggttgtaggctgtgctgaa
cgtcaaattgtcgttattgacttgaaccagcctcagcagatctttaaaaactcgctctct
cctttaaaatggcaaaccagagccatcagctgctatccacaaggaaacggttttgccgtc
ggctccattgaaggaagatgcggcattcagtacatcaatgaacaggaccagacaaaacag
gggtttgcattcaaatgtcaccgcaaaatgggcagcaacaccaccacttcaaccataaga
tcagtatcctcgacgtcacaagcgtatcctgtcaatgccatatcgttccatcccgtctat
ggcacattcagcacagctggttccgacggaaccttcagtttctgggataaggacgctcgc
cagaggctaaagtcattcccagagctcaacggctccatcacggccactgcgttcaacaaa
aacggaagcatctttgcatacgccctaggctacgattggtcccagggctatatgggcaac
aggcccgactatccggtgcagatcaagttgcatggtacgaaggatgacgaggtgaagcag
aagaagaaaagaatttag

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