Scheffersomyces stipitis: PICST_77977
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Entry
PICST_77977 CDS
T01023
Symbol
RPA135
Name
(RefSeq) DNA-directed RNA polymerase I
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PICST_77977 (RPA135)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_77977 (RPA135)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PICST_77977 (RPA135)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PICST_77977 (RPA135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
4839612
NCBI-ProteinID:
XP_001384965
JGI:
77977
UniProt:
A3LWA8
LinkDB
All DBs
Position
5:1443170..1446777
Genome browser
AA seq
1167 aa
AA seq
DB search
MRADFRTLEREKRFQNPPKDESAYPLLKDAVAPHVGSFNALTEGPDGGLLNLAVKDIGTK
TIFDSNDSERLGNKLRIRVESLQLAKPAVPNNDKISINRRTFPAECRERMSTYRSRLMLK
VAWSVNDGDEVSEIREAGQVPIMLKTNRCHLEKLSPQELVEQREESDELGGYFIVNGIEK
LIRMLIVQRRNHPMAIIRPSFGNRGAAYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFR
FSWRKNEYLVPVMMILKALIETNDREIFDGIVGADSANSFLTDRLELLLRTYKQYNLYSK
QETLAYLGDKFRVVFGATPDVSDIEVGKEVLRRIVLVHLPDNADKFRMLLFMIRKLYSLV
AGDCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNINLQIQSDINRGVAINFNDRKY
MSRVFMRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHR
GSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRIATEASDVSQVPKTL
AQLGVSPAHTFAAGPNLCCVQLDGKIVGWTTHEQGKIVADTLRFWKVEGGHGLPLDLEIG
YVPPSAKGQYPGLYIFGGHSRMMRPAKYLPLDKPDVLGPFEQVYMNVAVTPAEIEGNVHT
HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVALMHRSDNKLYRLQTG
QTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYDMDDAMIINKSADERGFGYGTVYKVE
KVDLSQSRRRGDPITQHFGFGDDEWPETWREKLDADGLPLIGVKVEEGDPIVAFFDETSG
KTKVKTYHSSEPAYIEEVKLLGDDSGDQEGQQITIKYRITRQPNIGDKFSSRHGQKGVCS
RKWPQIDMPFSETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDSTPWKFSE
DDTPADYFGEQLRSAGYNYHGNEPMYSGATGEELRADIYIGCVYYQRLRHMVNDKFQVRS
TGPVNSLTMQPVKGRKRSGGIRVGEMERDALIGHGTAFMLQDRLLNCSDYTQTSLCRSCG
SILTTQTTVPRIGSLATIRCRRCSTKLDSYVQKFGYANDSDIWEDGQGKKFVGGDDTTTV
AIPFVLKYLDSELSAMGIKMRYNVSPR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgatttcagaacgcttgagcgtgaaaagcgattccagaaccctcccaaggac
gaaagtgcctacccactcttgaaagatgctgtagcaccacatgtaggttcgttcaatgcc
ttgaccgagggacctgacggcggtcttttgaatcttgcagtaaaggatattggtacaaag
accattttcgactccaacgactcggaaagactaggaaacaagctccggatcagagtggag
tctttacaattggccaagcctgctgtgcctaacaatgacaagatctccatcaacagaaga
actttcccagctgaatgtagagaaagaatgtcgacatatcgttcaagattgatgttgaaa
gtagcttggtcagtcaacgatggcgatgaggtttctgagataagagaagccggccaggtg
cccatcatgttgaagactaacagatgtcatttggaaaagttatctccacaagagttggtg
gagcaaagagaggagtctgacgagttaggaggatatttcattgtcaacgggattgagaag
ttaattcgtatgttgattgtgcaacgtagaaaccatcctatggccattatccgtccttct
tttggtaacagaggtgctgcctacaccaagtttggtatccagatccggtccgtcagacca
gatcagacatctcagaccaacgttttacactacttgaacgacggtaatgtgacattccgt
ttttcgtggagaaagaacgagtatttggtgcccgtaatgatgatcttgaaggctcttatt
gagaccaatgaccgtgagatttttgacgggatcgtcggtgcagactccgccaattcgttc
ttgacggatcgtttggaattgttattgagaacatacaagcaatacaacttgtattccaag
caagaaacacttgcttacttaggtgacaagttcagagtcgtttttggtgctacaccagat
gtctcagacatagaagtgggtaaggaagtattgagaagaattgtcttggtccatttgccc
gacaacgctgacaagttccgcatgttgttgttcatgatcagaaagttgtactcgttggtt
gctggtgactgctctccagacaaccccgatgccactcagcaccaggaagtgttgcttgga
ggattcttatatggtatgatcatcaaggaaaagatcgaggaatacttgcagaacataaac
ctccagatccagtccgatatcaaccgtggtgtagccatcaacttcaatgacagaaagtac
atgtcgagagtgttcatgagaataaatgagaacattggtcagaaattgcagtacttcttg
tcgactggtaacttagtgtcgcagtctggtttggacttgcagcaagtctctgggtacact
gttgtagccgaaaagattaacttctacagattcatttcccatttcagaatggtgcacaga
gggtcattctttgctgaattgaagactaccactgtcagaaagttgttaccagagtcttgg
ggtttcttatgtcctgtccatacacccgatggttcgccctgtggtttgcttaaccatttg
gcccataaatgtagaattgctactgaagcatcagatgtctcacaagttcccaagacttta
gcgcagttgggtgtatctccagctcacacctttgctgccggacccaacttgtgctgtgtc
cagttggatggtaagattgtaggatggaccacccatgaacagggtaaaattgtagccgac
actctcagattctggaaggtagaaggcggccatggtcttccgctcgacttggaaatcggg
tacgtacctccttccgccaagggtcaataccctggtttgtatatctttggaggccactcc
agaatgatgagacctgccaagtacttgcccttggacaagccagatgtgttgggtcctttc
gaacaagtgtacatgaacgttgctgtaactccagctgaaatcgaaggcaatgttcacact
cacgtagagttctctcctaccaacattttgtcgatcttggctaacttgacgcctttctcg
gacttcaaccagtctccaagaaacatgtaccagtgtcagatgggtaagcagaccatgggt
actcctggtgtggcgttgatgcatagatccgacaataaattgtatagattacagactggt
caaactccaattgtcaaagctaatttgtacgatgattacggcatggacaacttccccaac
ggtatgaatgctgttgtggctgtcatttcctatactggttatgatatggatgatgcgatg
attatcaacaaatctgctgatgaaagaggctttgggtatggtacggtctacaaggtggaa
aaggtcgacttatcgcagtccagaagaagaggcgatcctatcactcagcatttcggcttt
ggtgacgacgaatggcccgaaacctggagagagaagttggatgcagatggtttgccattg
atcggagtcaaggtagaagaaggcgatcctatcgtagctttctttgacgagaccctgggc
aagacaaaagttaaaacataccactcttcagagccagcatacattgaagaagtcaagtta
cttggtgatgatagcggtgaccaggaaggccaacagatcaccatcaagtacagaatcacc
agacagcctaatattggtgacaagttctcatccagacatggacaaaagggtgtttgctcg
agaaagtggccccagatagacatgcccttctcggaaacaggtattcaacccgatgtcatc
atcaacccacacgctttcccatctcgtatgactattggtatgtttgtagagtcgttagct
ggtaaggcaggtgctcttcatggtatcgctcaagactccactccctggaagttcagcgaa
gacgatactcctgctgactactttggtgagcagttgagactggctggttacaactaccac
ggtaacgaacccatgtactctggtgctactggtgaagagttaagagcagacatctacatt
ggttgtgtctactaccagagattgagacacatggtgaatgacaagttccaagtcagatct
accggtcctgtcaactccttaaccatgcagcccgttaagggtagaaagagatctggtggt
atccgtgtgggtgaaatggaaagagatgccctcattggtcacggtactgccttcatgctt
caagacagattgttgaactgttctgactacacccagacgtctctctgtcgctcatgtggt
tccattttaaccacacaaaccactgtacctagaataggctcattggctaccatcagatgt
cgcagatgttccaccaagttggactcgtatgtacaaaagtttggctatgccaacgactct
gacatctgggaggatggccagggcaagaaattcgttggtggagatgataccactaccgtt
gccattccatttgtgttgaagtacttggactccgagttgtctgccatgggtatcaagatg
cgttacaacgtttctcctcgttga
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