KEGG   Scheffersomyces stipitis: PICST_77977
Entry
PICST_77977       CDS       T01023                                 
Symbol
RPA135
Name
(RefSeq) DNA-directed RNA polymerase I
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PICST_77977 (RPA135)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_77977 (RPA135)
Enzymes [BR:pic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PICST_77977 (RPA135)
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     PICST_77977 (RPA135)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 A24_N_bact
Other DBs
NCBI-GeneID: 4839612
NCBI-ProteinID: XP_001384965
JGI: 77977
UniProt: A3LWA8
LinkDB
Position
5:1443170..1446777
AA seq 1167 aa
MRADFRTLEREKRFQNPPKDESAYPLLKDAVAPHVGSFNALTEGPDGGLLNLAVKDIGTK
TIFDSNDSERLGNKLRIRVESLQLAKPAVPNNDKISINRRTFPAECRERMSTYRSRLMLK
VAWSVNDGDEVSEIREAGQVPIMLKTNRCHLEKLSPQELVEQREESDELGGYFIVNGIEK
LIRMLIVQRRNHPMAIIRPSFGNRGAAYTKFGIQIRSVRPDQTSQTNVLHYLNDGNVTFR
FSWRKNEYLVPVMMILKALIETNDREIFDGIVGADSANSFLTDRLELLLRTYKQYNLYSK
QETLAYLGDKFRVVFGATPDVSDIEVGKEVLRRIVLVHLPDNADKFRMLLFMIRKLYSLV
AGDCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNINLQIQSDINRGVAINFNDRKY
MSRVFMRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVHR
GSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRIATEASDVSQVPKTL
AQLGVSPAHTFAAGPNLCCVQLDGKIVGWTTHEQGKIVADTLRFWKVEGGHGLPLDLEIG
YVPPSAKGQYPGLYIFGGHSRMMRPAKYLPLDKPDVLGPFEQVYMNVAVTPAEIEGNVHT
HVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVALMHRSDNKLYRLQTG
QTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYDMDDAMIINKSADERGFGYGTVYKVE
KVDLSQSRRRGDPITQHFGFGDDEWPETWREKLDADGLPLIGVKVEEGDPIVAFFDETSG
KTKVKTYHSSEPAYIEEVKLLGDDSGDQEGQQITIKYRITRQPNIGDKFSSRHGQKGVCS
RKWPQIDMPFSETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDSTPWKFSE
DDTPADYFGEQLRSAGYNYHGNEPMYSGATGEELRADIYIGCVYYQRLRHMVNDKFQVRS
TGPVNSLTMQPVKGRKRSGGIRVGEMERDALIGHGTAFMLQDRLLNCSDYTQTSLCRSCG
SILTTQTTVPRIGSLATIRCRRCSTKLDSYVQKFGYANDSDIWEDGQGKKFVGGDDTTTV
AIPFVLKYLDSELSAMGIKMRYNVSPR
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgagggctgatttcagaacgcttgagcgtgaaaagcgattccagaaccctcccaaggac
gaaagtgcctacccactcttgaaagatgctgtagcaccacatgtaggttcgttcaatgcc
ttgaccgagggacctgacggcggtcttttgaatcttgcagtaaaggatattggtacaaag
accattttcgactccaacgactcggaaagactaggaaacaagctccggatcagagtggag
tctttacaattggccaagcctgctgtgcctaacaatgacaagatctccatcaacagaaga
actttcccagctgaatgtagagaaagaatgtcgacatatcgttcaagattgatgttgaaa
gtagcttggtcagtcaacgatggcgatgaggtttctgagataagagaagccggccaggtg
cccatcatgttgaagactaacagatgtcatttggaaaagttatctccacaagagttggtg
gagcaaagagaggagtctgacgagttaggaggatatttcattgtcaacgggattgagaag
ttaattcgtatgttgattgtgcaacgtagaaaccatcctatggccattatccgtccttct
tttggtaacagaggtgctgcctacaccaagtttggtatccagatccggtccgtcagacca
gatcagacatctcagaccaacgttttacactacttgaacgacggtaatgtgacattccgt
ttttcgtggagaaagaacgagtatttggtgcccgtaatgatgatcttgaaggctcttatt
gagaccaatgaccgtgagatttttgacgggatcgtcggtgcagactccgccaattcgttc
ttgacggatcgtttggaattgttattgagaacatacaagcaatacaacttgtattccaag
caagaaacacttgcttacttaggtgacaagttcagagtcgtttttggtgctacaccagat
gtctcagacatagaagtgggtaaggaagtattgagaagaattgtcttggtccatttgccc
gacaacgctgacaagttccgcatgttgttgttcatgatcagaaagttgtactcgttggtt
gctggtgactgctctccagacaaccccgatgccactcagcaccaggaagtgttgcttgga
ggattcttatatggtatgatcatcaaggaaaagatcgaggaatacttgcagaacataaac
ctccagatccagtccgatatcaaccgtggtgtagccatcaacttcaatgacagaaagtac
atgtcgagagtgttcatgagaataaatgagaacattggtcagaaattgcagtacttcttg
tcgactggtaacttagtgtcgcagtctggtttggacttgcagcaagtctctgggtacact
gttgtagccgaaaagattaacttctacagattcatttcccatttcagaatggtgcacaga
gggtcattctttgctgaattgaagactaccactgtcagaaagttgttaccagagtcttgg
ggtttcttatgtcctgtccatacacccgatggttcgccctgtggtttgcttaaccatttg
gcccataaatgtagaattgctactgaagcatcagatgtctcacaagttcccaagacttta
gcgcagttgggtgtatctccagctcacacctttgctgccggacccaacttgtgctgtgtc
cagttggatggtaagattgtaggatggaccacccatgaacagggtaaaattgtagccgac
actctcagattctggaaggtagaaggcggccatggtcttccgctcgacttggaaatcggg
tacgtacctccttccgccaagggtcaataccctggtttgtatatctttggaggccactcc
agaatgatgagacctgccaagtacttgcccttggacaagccagatgtgttgggtcctttc
gaacaagtgtacatgaacgttgctgtaactccagctgaaatcgaaggcaatgttcacact
cacgtagagttctctcctaccaacattttgtcgatcttggctaacttgacgcctttctcg
gacttcaaccagtctccaagaaacatgtaccagtgtcagatgggtaagcagaccatgggt
actcctggtgtggcgttgatgcatagatccgacaataaattgtatagattacagactggt
caaactccaattgtcaaagctaatttgtacgatgattacggcatggacaacttccccaac
ggtatgaatgctgttgtggctgtcatttcctatactggttatgatatggatgatgcgatg
attatcaacaaatctgctgatgaaagaggctttgggtatggtacggtctacaaggtggaa
aaggtcgacttatcgcagtccagaagaagaggcgatcctatcactcagcatttcggcttt
ggtgacgacgaatggcccgaaacctggagagagaagttggatgcagatggtttgccattg
atcggagtcaaggtagaagaaggcgatcctatcgtagctttctttgacgagaccctgggc
aagacaaaagttaaaacataccactcttcagagccagcatacattgaagaagtcaagtta
cttggtgatgatagcggtgaccaggaaggccaacagatcaccatcaagtacagaatcacc
agacagcctaatattggtgacaagttctcatccagacatggacaaaagggtgtttgctcg
agaaagtggccccagatagacatgcccttctcggaaacaggtattcaacccgatgtcatc
atcaacccacacgctttcccatctcgtatgactattggtatgtttgtagagtcgttagct
ggtaaggcaggtgctcttcatggtatcgctcaagactccactccctggaagttcagcgaa
gacgatactcctgctgactactttggtgagcagttgagactggctggttacaactaccac
ggtaacgaacccatgtactctggtgctactggtgaagagttaagagcagacatctacatt
ggttgtgtctactaccagagattgagacacatggtgaatgacaagttccaagtcagatct
accggtcctgtcaactccttaaccatgcagcccgttaagggtagaaagagatctggtggt
atccgtgtgggtgaaatggaaagagatgccctcattggtcacggtactgccttcatgctt
caagacagattgttgaactgttctgactacacccagacgtctctctgtcgctcatgtggt
tccattttaaccacacaaaccactgtacctagaataggctcattggctaccatcagatgt
cgcagatgttccaccaagttggactcgtatgtacaaaagtttggctatgccaacgactct
gacatctgggaggatggccagggcaagaaattcgttggtggagatgataccactaccgtt
gccattccatttgtgttgaagtacttggactccgagttgtctgccatgggtatcaagatg
cgttacaacgtttctcctcgttga

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