Scheffersomyces stipitis: PICST_77984
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Entry
PICST_77984 CDS
T01023
Name
(RefSeq) predicted protein
KO
K08518
syntaxin-binding protein 5
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_77984
Membrane trafficking [BR:
pic04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PICST_77984
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
PICST_77984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
4839066
NCBI-ProteinID:
XP_001385045
JGI:
77984
UniProt:
A3LUT8
LinkDB
All DBs
Position
5:complement(127562..131094)
Genome browser
AA seq
1075 aa
AA seq
DB search
MFSKMKSRKAPLSLSSVSNVIKTSGTKDLSPSHFNAKDIEMNFVTQLGLPKDSIVAVAYD
PVQSLLAVSTTYNEVRVYGQNSVEVVFEFNATHPITKLKFVKGVYLVAITESSGGITVLS
LHSKSILVATSAPGAITAVEADPSLDFIILGLTNGSLMFFDVDRLNMSPLRVDNLQKKVL
PKQKMSPVLHLEWHPRDIGTVLVTYSHCAILYSIASGELKSKFVYVVEKGAKSFELSSFV
ANGGKKKMFGSSKDVIPELTESHFHPNGLHVLTLHRDNTIAFWDAASGALIQTRNIFEVG
LHKPGPSLEIPEVFHPIQSVRWICGEDPELTQLVICGAGAEGNLLHVLDFGYTLKYSMTS
NEKQAEFYASPQSGQRILPVLFNLRKQDEQEYITSILPISGDNEPYFNGNHNPSYLLLVS
NLNALYIIQFSTVGGAQGSTDLGGLLLPPSIAFIHPPVTSSSVQFVKRKDWFSMMSTRVS
GGAAAKSNLLLKGGAPVENSSIPKSFGYNDTYRNILVTGHESGLVRLLDITKTEFSEAES
IVQISLKETLYNSGNPNSVKIVDVSCAFGSKEMLVALGSGDVVICKFGRSNGSQGNHSTK
DYARCPVQHENGNGKILDIRERISGSVTQTSTFLPVSLLQLDKKEKVSCIKMSDIGFAAV
AYTSGRLVVCDITRGPAIILNLESISEHLVTVTGECYATVVEFSIMEYGQDGYSSVLLHV
GTNCGGNLLNFKIVPMGNGGFEVVFTDRTIGLNYKSGAADPSLLKLDQIIPINAVDGSSA
VAEMEIFNKLGQGVVIPGYVVTTSERDLRVLKIPKTKLSHKVVEDSCLRSGVLNFHNNGV
MVASLVKTGYVKLFSLPSLADIADIKVPKEIYVKIKRSLESGIASQSEILSTGDFFVRSS
KSEFLHMSAFDKGSRLHRSHNKENVTDLLFNENAIIPPRPTAGTLSWATGQTGYMSVEDL
ALLVAGPNRKPAKHPESQLAHNISPEANLSQGYGGYGAASQQSSRGYKEPVRRSTTASSG
GVAGQGWVRSLQAGLESVEETIGGYANSASEAMTESVEGQKRAMYSAAFKDKFGF
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatgaaatctaggaaagctccgctttcgctaagttcggtatccaacgtc
atcaagacttcaggaacaaaagacctttccccatcacactttaatgctaaggatatagag
atgaattttgtgacccaattgggattgcccaaggattccattgtggctgtagcttacgat
cctgttcaatcgttattggctgtttctactacatacaacgaggttcgtgtatatggtcag
aattcagtcgaagttgtcttcgaattcaatgctactcatcccattacaaaattaaaattc
gttaaaggtgtatatttagttgctatcaccgagtcttctggaggaatcactgttctatca
ttacattccaaatccatcttggtagctactctggcccctggagctatcacagccgtagaa
gcagatccttccttggattttattatcttgggacttaccaatggctcactcatgttcttt
gatgtagataggttaaacatgagccctctacgtgtagataatcttcagaaaaaagtgtta
cccaagcagaagatgtcgccagttttacatctcgaatggcaccccagagacattggtact
gttctagtcacctattctcattgtgctattctctattctattgcctctggagaactcaag
agcaaatttgtctatgtggtcgaaaaaggagcaaaatcatttgaactttcttcgtttgta
gccaatggaggcaagaaaaagatgtttggttcctcaaaggatgtgattccagaattgacg
gagtctcattttcacccaaatggattacatgttttgacgttgcacagagataacactatt
gccttctgggatgcagctagtggagcacttattcaaacccgaaatatttttgaagttggt
ctccacaagcctgggccttctttggagataccagaagtgtttcaccctattcagtcggtc
agatggatctgtggtgaggatccggaattgactcagcttgtaatatgtggagctggtgct
gaaggaaatttgctacacgtacttgattttggctatactttgaagtattccatgacgtcg
aatgaaaaacaggcggaattctatgctctgccccaaagtggccaaagaatccttccagtg
ttgttcaacttgagaaaacaagatgaacaagagtatatcaccagtattttgccaatttca
ggtgacaacgagccatatttcaacggcaatcataatccttcgtatttgcttttagtcagc
aatctcaatgctttgtatataatccaattctctaccgttggtggagctcagggcagcact
gatttgggtggattacttcttccaccatccatagcatttatacatccaccagtgactagc
tcatcagtccagtttgtcaaaagaaaggactggttcagtatgatgtccactagagtttcg
ggcggcgctgcagctaagtccaacttgttattgaaaggaggtgctcctgtcgagaactcg
tctattcctaagtcctttggctataatgatacttaccgtaatatcttagtcactggtcat
gaaagcggcttggtgcgtcttttggatatcaccaagacagaattcctggaagcggagagc
atcgtacaaatcagtcttaaagaaactctctataacagtggaaaccccaactctgttaaa
atcgtggatgtttcttgtgcctttggcagtaaagagatgttggtggcattgggcagtggc
gatgtggtaatttgtaaattcggtagatccaacggcagccaaggaaatcatagcactaag
gattatgctagatgtcccgtgcaacatgaaaatggaaatggaaagatattagacataaga
gaaaggatcctgggctccgtaactcagacatctacatttttgcctgtctcattgcttcaa
ttggacaaaaaagaaaaagtttcttgcatcaagatgagtgacattgggtttgcagctgta
gcatataccagtggccgtttggtcgtatgcgacatcaccagaggaccagccataattttg
aaccttgagtctatttcggagcatcttgttaccgtgactggtgaatgttatgccactgtt
gtagagttttctattatggaatatgggcaagatggatattcttcggttcttcttcatgtg
ggcaccaactgtggaggtaacttgcttaacttcaagatcgtaccaatgggtaatggaggg
ttcgaagttgttttcactgacagaacaattgggttgaactacaagtctggggctgctgat
cctctgctattgaaattggatcagatcatcccgatcaatgctgttgatggaagttctgca
gttgctgaaatggagatattcaacaagctagggcaaggtgtagttattcccggatatgtt
gttactacgtctgaacgagaccttagagttcttaaaattcccaagactaaattgtcccac
aaggttgtggaggatagctgtttgagaagcggagttttgaatttccataacaatggtgtt
atggttgcatctttagtaaaaactggctacgtcaagttattttcgctaccatcattggca
gacattgctgatataaaggtacccaaggaaatttatgtgaagatcaagagatcgcttgaa
tctggaattgcctctcaatccgaaatcttgagcacaggagatttctttgttcgctccagc
aaaagtgaatttctacatatgtctgcttttgataaaggaagcagacttcatcggtctcat
aataaagaaaatgtgactgatttacttttcaatgagaatgctatcattcctccccgtcct
acagctggtactctactgtgggcaacaggacaaacaggctacatgtctgtagaggacttg
gctctattagttgcgggacctaatagaaagcccgctaagcatcccgaaagtcagttggcc
cacaatatcagtcccgaagcaaacttgagtcaaggatatggaggctatggagctgcatct
caacaatctagccgtggctacaaggaaccggtcagaagatctacaactgccagctctggt
ggtgtggcaggtcaaggctgggtgcgcagtctccaggctggacttgagtctgtggaagaa
actattggaggatatgccaattctgctagtgaagctatgacagaaagtgttgaaggacaa
aagagggccatgtactctgcagccttcaaggacaagtttggattttag
DBGET
integrated database retrieval system