Scheffersomyces stipitis: PICST_78806
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Entry
PICST_78806 CDS
T01023
Symbol
SHM1
Name
(RefSeq) Serine hydroxymethyltransferase, mitochondrial precursor (Serine methylase)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00260
Glycine, serine and threonine metabolism
pic00460
Cyanoamino acid metabolism
pic00630
Glyoxylate and dicarboxylate metabolism
pic00670
One carbon pool by folate
pic00680
Methane metabolism
pic01100
Metabolic pathways
pic01110
Biosynthesis of secondary metabolites
pic01200
Carbon metabolism
pic01230
Biosynthesis of amino acids
pic01240
Biosynthesis of cofactors
pic04981
Folate transport and metabolism
Module
pic_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PICST_78806 (SHM1)
09102 Energy metabolism
00680 Methane metabolism
PICST_78806 (SHM1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PICST_78806 (SHM1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PICST_78806 (SHM1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PICST_78806 (SHM1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PICST_78806 (SHM1)
Enzymes [BR:
pic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PICST_78806 (SHM1)
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Ortholog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
4840399
NCBI-ProteinID:
XP_001385618
JGI:
78806
UniProt:
A3LY87
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All DBs
Position
6:1406626..1408164
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AA seq
492 aa
AA seq
DB search
MLSSVSSTLRVQSKRLPVAIARSYALSAHAQALISKPVQEVDPEMAEILSQEKARQKNSI
TLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEIIDKAESLCQKRALEAFDLDP
AQWGVNVQPLSGAPANLYAYSAVLEVGDRIMGLDLPHGGHLSHGYQTPSAKISYISKYFQ
TMPYRLNEETGIIDYDTLEANAILFRPKIIVAGASAYSRVIDYRRMRAIADKVGAYLLSD
MAHISGLVSAGVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKGKEIPYDLE
RKINFSVFPAHQGGPHNHTISALAVALKQTQYPEYKEYQRDVVANASSFANALVSRGFKL
VSDGTDTHLILVDLRSKNIDGARVEAVLERANIAANKNTVPGDKSALFPSGLRVGTPAMT
TRGFGPEEFDKVAKLIEKAVEISLALKAQEQGSVPKELLASFKKLADSSAEVKALAKEVS
DWASTFPVPGDL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctgtctccagtaccttgagggtacaatccaagagattgcccgttgcaatt
gccagaagctatgctctttcagcccacgctcaggcactcatctccaagccagttcaggaa
gtagacccggaaatggctgagatcttgtctcaagagaaagccagacaaaagaactccatc
acgttgattccttccgaaaacttcacctcaaaggccgtgatggaccttttgggatcggaa
atgcagaacaagtactccgaaggctacccaggcgagagatactatggtggaaatgaaatt
atcgacaaagctgagtcattatgtcagaaaagagcccttgaagcttttgacttagaccct
gcacagtggggtgtcaatgtccagccattatcgggtgctccagccaacttgtacgcctac
tcagctgttcttgaagtcggagacagaattatgggtttagaccttcctcatgggggccat
ttgtcgcatggttaccaaaccccgtccgctaagatctcgtacatctccaagtacttccag
acgatgccatatcgtttgaacgaggagacaggtatcatcgactacgacaccttggaggcc
aacgccattttgttcagacccaagatcattgttgctggtgcttctgcctactctcgtgtc
attgactaccgtaggatgcgcgcaattgccgataaggtcggagcctacttgttgagcgat
atggcccacatttccggtttggtctcggccggagtgactgattctccattcccatactcg
gatatcgtcaccacgaccacgcacaagtcattgagaggtcccagaggtgccatgatcttt
ttcagaaagggtatcagaaaggtaaccaaaaaaggtaaagaaatcccctacgacttggaa
agaaagatcaacttctctgtctttcctgcccaccagggtggtccacacaaccacaccatc
tctgcgttggctgtggccttgaagcagacacaataccctgaatacaaagagtaccagaga
gatgtcgttgccaatgctagctcatttgccaatgctcttgtgtcacgtggtttcaaattg
gtctctgatggaactgatacccacttgattcttgttgacttgagatccaaaaatattgac
ggagctcgtgttgaggctgttttggagagagccaatatcgctgccaacaaaaatactgtt
ccaggcgataagtcggctttattcccctcgggcttgagagttggaaccccagcaatgact
accagaggcttcggccctgaggaatttgacaaggttgccaagttgatagaaaaggctgta
gaaatctcgcttgccttgaaagctcaggaacaaggttctgtccctaaggagttgttggct
tcgttcaagaagttggctgattctagtgctgaagtcaaggctttggccaaagaagtatcg
gactgggcctcgaccttccctgtcccaggcgacttgtaa
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