Scheffersomyces stipitis: PICST_80274
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Entry
PICST_80274 CDS
T01023
Name
(RefSeq) predicted protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_80274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_80274
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PICST_80274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
4851421
NCBI-ProteinID:
XP_001387976
JGI:
80274
UniProt:
A3GGM2
LinkDB
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Position
1:complement(1772753..1774638)
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AA seq
591 aa
AA seq
DB search
MSQSPVKKEPIVISTSGSAKAGSSSESGWQEIPLKSCTTDEVKDIRFHIMRFQNKQDVNI
MDEFTKPVRLHRKDPRNIQFQLTRAEIDLRKKEQEEAKLERQRLKEEAEELAEKEAIEKG
EDPKKYRKNGPDMSQVAPDGGARKAKKNLFKRKTRQINLMDDEKRKLRYEEYYPWVVEDY
DGKNVFVGNYEAGSSESQHVLFVFDKDGFKMVPAEKVYKFTPRNKYATLTLEEAEAKMEK
NSSVPRWLMRHMEDKSNASDSTPDQRFRNSVPSNGSVLPAGGSSSRRRLRTVSGGGGSND
RDSDHDDLDFDEEFADDEEAPIMDGDEEENKLSEQKIKKEMLKAAHFDGQSDAEGDDDLE
DLFETEKSRKVDKEGKKLRKVLNKREGGVYDSDEDENLNPYLSKSDLESDDESDEETDVK
KEDDPNASDLKPTNVPRSFYAYNIGDGFVLIKAPADFLKGFPQGEWTPNGRKRPSPGATA
SPRKKIKIEDGSAPPKLKLKIKSESSRESMSPSPVPQPAAASVDLNSAGPDNVLVTVKEV
LDIVRDNPLTTKELLFRLKSRVSANKENKLRIINIVKQNLRLVDTKLVLKE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatctcccgtgaaaaaagagccgattgtaatctcaacaagtggatccgcgaag
gcgggatcttcttccgaatcaggctggcaggagattccactcaagctgtgtacgaccgac
gaggttaaggacatccgctttcacatcatgcggttccagaacaagcaggatgtgaatatc
atggatgagttcaccaaaccggtacgtttgcatagaaaagatccacggaatatccagttc
cagctcactagagcggagatagatctccgtaaaaaggagcaggaagaagccaaacttgag
cggcaacggctcaaagaggaagccgaagagttagctgaaaaggaggctatagagaaggga
gaagatcccaagaaataccgcaagaatggaccggatatgtcgcaggtagcacctgatgga
ggagccaggaaagcgaaaaagaatcttttcaaacgtaaaacgagacagattaacctcatg
gatgatgaaaaacggaaattgcggtatgaagagtactatccatgggttgtggaagattat
gacggcaaaaacgtctttgtaggtaattatgaggctggctccagtgagtctcaacatgtg
ctctttgtatttgataaggacggcttcaagatggttccggcagaaaaagtgtataagttc
actcctcgtaacaagtatgcgaccttgacattagaggaggctgaagcaaagatggaaaag
aatctgtctgtgcccagatggctcatgagacatatggaagataaatcgaatgcttcagac
agtactcctgatcaaagatttcgtaacagcgttccaagcaatggaagtgtcctaccagct
ggtggaagttctagtagaagaagattacgaactgttagcggcggaggtggctccaacgat
agagattctgatcacgacgatttggattttgatgaagagtttgcagacgacgaagaagca
ccgattatggatggggacgaagaagagaacaagttatctgagcagaagatcaagaaggaa
atgttgaaagctgctcattttgatgggcagtctgatgccgagggtgatgatgatttggaa
gatttgtttgagacagaaaagtccagaaaagtagacaaggaaggtaagaagttgcggaag
gtgttgaacaagcgtgaaggaggagtctacgacagtgacgaggacgaaaatttgaatcct
tacctttcaaaatcggatttggaaagcgatgacgagagcgatgaggagacagacgtaaag
aaagaagacgaccccaatgccagtgacttgaaaccaaccaacgtgccccgttccttctac
gcatacaacataggcgatggttttgttcttataaaagcaccagcagacttcttgaagggt
tttccacaaggtgaatggactccaaatggtagaaaaagaccttctccaggggccacggct
tctccaagaaagaagataaagatagaggacggcctggctcctcctaagcttaagctcaag
atcaagtctgagagcagcagagaaagtatgtcaccttccccagtccctcagccagctgct
gctagcgtagacttgaattcagcagggcccgataacgtccttgttacggtgaaggaagtg
ctagacattgttagagacaacccacttacaacaaaagaattgttgttccggttgaagagc
agagtcagtgccaataaagagaacaagcttcggatcattaatattgtcaagcagaacttg
aggttggtggatacgaagttggtgttgaaggagtaa
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