Scheffersomyces stipitis: PICST_80515
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Entry
PICST_80515 CDS
T01023
Symbol
CUL4
Name
(RefSeq) cullin, ubiquitin ligase activity
KO
K10609
cullin 4
Organism
pic
Scheffersomyces stipitis
Pathway
pic03420
Nucleotide excision repair
pic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PICST_80515 (CUL4)
09124 Replication and repair
03420 Nucleotide excision repair
PICST_80515 (CUL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_80515 (CUL4)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_80515 (CUL4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_80515 (CUL4)
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
PICST_80515 (CUL4)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PICST_80515 (CUL4)
TCR (transcription coupled repair) factors
Cul4-CSA complex
PICST_80515 (CUL4)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PICST_80515 (CUL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
4851110
NCBI-ProteinID:
XP_001387419
JGI:
80515
UniProt:
A3GFR1
LinkDB
All DBs
Position
1:957634..960270
Genome browser
AA seq
783 aa
AA seq
DB search
MLDFGNLEASSSSLSTRDAGPSHLTPQFQRSSDSSDTNTSNTHKRIKPNFEPPTKPQVLE
SLQVAKSAAEEVIDLVLEGKPLKRSYYTYYKDIESICRYKHAEKSKLASLVFEKLDNAYK
VVKQKTTSRNIRDNISDSEPYKWTNAFLAIIQDWKDKLSRLSKLFAYLDRGYLLPHATKK
TILEYGLGVYVEDILANMKEDSKNEISELVLKRYLLQLRYDQSVLHIYSESSEAFTRTLM
RLNFNNDYSLHKNLSDDIAEHYRSISRKWHNDPDYLDRVCSILKGEVDFFRDCGQSQEFL
DTLYKSLKFVLIFYDHSEIFVEVLPGLLESENGPRQLQTLYKFCEQSLNDFALDSMPMFR
TQWGAYVEKKVMEVIETSKTAGSGSNVLSLLVDIFVKYDTLSNSYLDEKFEFELRNYFKK
GLNDRTNSSFIVYQLCKYCDSYFKGPSKKSSLPETFEEFKKNVLIIFKAIENKRDFTEIY
QKDLSKRLLVSRNTNFDHEKELADSLLEVIGESDESVGLQVMFKDLNQSKDVYSSLIEST
GIEFNPLVLEKKYWPDIPKMDTDITLPSELQLLLDQFTAKYTSSGERFKSQKLDWSNYTL
HQLSINAEFESGTKELVVNLLQAVVILVFNDVNSYTFVELQQLTGMEPKLLKRVLGSVSS
EKYAILSRDGDIYSFNSKFTDKSSRIKIPLSKDKDSMKISASVSESDTNRIISRNRTDEL
KGAIVKVMKEFKQLSVTELLNKAIEGVEKRGPVTLTELKKNIDDLVDSEYLRRVDRETLA
YIP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgttggatttcggaaacttggaggcgtcttcgtcgtctttgtcaacccgagatgccgga
ccttcccatttgaccccacaattccagcgctcctcagatagtctggacacaaataccagc
aacacccataagcggataaaaccgaacttcgagccacctactaaaccacaagtgctcgag
ctgttgcaggtagccaagtcagcggccgaggaggtgattgatcttgttttagaagggaag
cctttgaaaaggagctactatacctactacaaagacatagaatccatctgcagatacaaa
catgctgaaaagtcaaaattagcatcacttgtgtttgaaaaattggacaatgcgtacaaa
gttgtcaaacagaagactacatctcgcaatattagagacaatatttcagacagcgaaccc
tataaatggactaatgcgttcttggccattatccaagattggaaagataagctcagtcga
ttaagtaaactttttgcctatttggatcgaggatatttacttccacatgctactaagaag
acaatcttggagtatggattaggtgtatatgtagaggatatacttgctaacatgaaagaa
gacagcaaaaacgagatatccgagttggtattgaagagatatcttctacagctacgatac
gatcaatctgtgctacacatttattctgagtctctggaggcttttacgcgtacattaatg
aggttgaacttcaacaacgactatctgctccacaagaacctttcagacgacattgctgaa
cattaccgtagcatcagtaggaaatggcacaacgatcctgactatttggacagagtatgt
tccattctcaaaggcgaagtagacttctttcgagactgtggccaatcacaagagttcctc
gatactctctacaagtcattgaagtttgtgttgatcttttatgaccattcagagatattt
gtcgaggtattgcctggcttgttagagagcgaaaatggcccgagacagcttcaaacgttg
tacaagttctgtgagcagtcgttgaatgactttgctctagattctatgccaatgttcaga
acccaatggggagcctatgtagagaaaaaggtgatggaagtgatagaaacgtccaagact
gcgggatctgggtccaatgttctttctttgctagtagatatttttgtcaagtatgacact
ctttctaacagttatttggatgagaagtttgagtttgagcttagaaactacttcaagaaa
ggattgaacgatagaaccaacagttcgttcattgtttatcagctttgtaaatattgcgac
tcatacttcaaaggaccatccaagaagctgagcttacctgagacgtttgaggagttcaag
aaaaatgttcttatcatcttcaaagccatcgagaacaagagagattttacggaaatctac
cagaaggacctatctaagcgacttttggtaagtaggaataccaacttcgaccatgaaaaa
gaactagcagactctctcctcgaagtcattggcgaaagtgatgaaagtgtaggactccaa
gttatgttcaaagacttaaatcagtctaaggatgtttattctctgttgattgaaagtact
ggaattgaattcaatccattggtgttggaaaagaagtattggcccgacattccgaagatg
gatacagatataacgcttccttccgagcttcaacttttgctagatcaattcaccgctaaa
tacacgtcgtcaggtgaaagattcaaaagccagaaattggactggtccaactacacattg
caccagctttcaattaatgcagagtttgaaagtggaacaaaagaattggttgtgaatcta
cttcaggcggttgttatattggtgtttaacgacgttaacagctatacttttgtcgagctt
cagcaattgactggtatggaacccaaacttcttaaacgagtcttgggatccgtttcttca
gagaagtacgcgattctttcgcgagatggggatatctatctgttcaattccaaattcaca
gataagtcgtcccgaatcaagattccactttcaaaagataaggattcgatgaagatctcc
gcttctgtatctgagctggatacaaatcgcattattctgcgaaacagaacagacgagctc
aagggtgccattgtaaaggttatgaaggagttcaagcagttgagtgtcacagagttgttg
aacaaggccatcgaaggagtggaaaagagaggaccagttactttgactgaattgaagaag
aatatcgatgatttggtggacagcgagtatttacgcagagtcgacagggaaacgttggca
tacataccgtga
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