Scheffersomyces stipitis: PICST_80553
Help
Entry
PICST_80553 CDS
T01023
Symbol
NUP145
Name
(RefSeq) Nucleoporin NUP145 precursor (Nuclear pore protein NUP145) Contains: Nucleoporin NUP145N (N-NUP145) Nucleoporin NUP145C (C-NUP145)
KO
K18720
nucleoporin NUP145
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_80553 (NUP145)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_80553 (NUP145)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_80553 (NUP145)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
4850914
NCBI-ProteinID:
XP_001387319
JGI:
80553
UniProt:
A3GF65
LinkDB
All DBs
Position
1:<422427..426701
Genome browser
AA seq
1348 aa
AA seq
DB search
MFGSTNTGNNNWGASTGFAKSSSFSGLSGGSNSLFGNSGGASSNTNSAAGTLFGSTNATN
PTSGQGSAVSGGLFGNSKTASTGMSSGLFESSKRQAPSGTFGNPTNNTATASGGLFGNSG
NTVPTSGGLFGNSSTNNAISGAGLFGSNAVGSGIGSIQKQNQNIGGGLFGSSNANVGSSL
FGAPQQQTTYQPTINTSNPYSYDKVLTNLQTTLSGMPESITNNLVAEDEAKDTGDRKRRF
SYLEKKSSDKPQSSLLGKLGRTFRVFRNSAASTGLSSIRGLFTDSNYTKSNINQSILPKQ
QASGGPKNGVSKPSFRSSVDSRRMGSIKKLIIKSKPSKFHLIDADRVINTKRARLANVTN
LGNDILPDKYSSDEDSEGESEQNTQKGFSRYPYNILKDDDVKNKSNSKTIIGKSVELTEE
VEEESSIKYNKDGYWSSPSIDELSSMSLEELSSIDNFILGRKGFGQLAYNFPVDLSLTMQ
SAQSNRVSLEKELFGNTFQLERMIVLLYTNDAHNKPPIGMGLNVPATVTLEGAKPREGVP
VGDYIKQLKLQKGMEFVTYDPITFVWVSKVKHFSVWGLIEDDGTELSKKYMEMKRKQDEY
EETAELEYSRVYENREYLQEIKKQKLLNQTIAVPGGWKYANTTQQSPLDFKRKLLNNEIN
SQLDLHRKENVVNELSHVSDITLDSDENDRSVSPDSIVFAENEDLSDGGNNFDYLKQLVG
NLPADVDMDEIVNEKAYEPEIVNDAVFDSIQIWPNLATSEDWIVQLKLANDMNSALAQSF
GDSEGAKKQISPEDIDAVLFADFNRESLKKDQISTPSRDNKLAVIEDIEPQVDDEIFPNN
ISRILYDFLTKTIIETRTNSYPKVVETSGLSFVSLITNDSVKDEKQLFSLGASLFDKLST
EKYTELEQNIVNYLNETGRKRAFNIWLKEYNSNDIEILISQVQSNSLELIFVYVCAGDLK
EAINIALESNNSHLSVILTLTDSNDDAVRGIASQQLKAWRDSSSLHLIPSPVVKIYKILS
GEFDDFVNELPWNINLALKLYYGDESAKLHEVLNDSLERSDNAASQASEVIDILQVYCSF
QTDGKDKALKKLISSSLNSKLKWFFFKVISSDVVDTTFDGISLSFGMYLESVKLWKEAIF
VYSHLSDDEQSKNKLRDVVISSIKNINSDDKNYLVSVLKVPTGLLSEAIGISKGADGDHW
GECEAFIDAQLWENAHFVIITKLGPHVVISKNKNAENSLLELISRFPQKGTIISTWNSGA
GIYEKYIALTRDENNIEVLRFLLSNIPLAKEISSFETKSALKIISRKVGDVAIEKRSDVD
GVEGKVQQLYLGESEKKYFSVRLQTDNV
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccacaaatacaggcaacaataactggggggcttctaccggatttgccaag
tcgtcgtcatttagcggactttctggtggctctaatagtctctttgggaactctggtggg
gcttcatcaaacacaaattcagctgctggaacactttttggatcaacaaacgccaccaac
ccaacttcggggcagggttctgccgtttccgggggtctcttcggcaactctaaaactgct
tcaacgggaatgtcgtcaggtttgtttgagtcttcaaaacgacaggctccttctggaact
tttggaaatcccaccaataacacagctacagcatccggaggactctttggaaactcgggc
aatacagtgccgacatcaggaggactctttggaaatagctctactaataatgccatttct
ggtgccggtctttttggttctaatgctgttggaagcggaatcggatcaatacagaaacaa
aatcaaaacataggtggaggtctttttggatcttctaatgctaatgtaggttctagtttg
tttggtgctcctcagcagcagactacttatcagcctactataaataccagtaacccctat
tcatatgataaggtgctaaccaacctccagacaacgttgtcgggaatgccggagtctata
actaacaacctcgtagcagaagacgaagcaaaagatactggagacagaaaaaggcgattc
tcatacttggaaaagaaatccagcgataagcctcaatcaagtctattgggaaagttaggt
agaacgttccgggtgttcagaaactcggctgctagtactggactttctagtatcaggggt
ttgtttacagactccaactatacgaagtctaacataaaccagagcatattgccaaaacag
caagcctctggaggacccaaaaatggagtgtccaaaccttctttccgttcttccgtcgat
tcacgtcgtatgggctctatcaagaagttgatcataaaatccaagccatcaaagttccat
ttgatagatgccgacagggtaatcaataccaagagagctagattggcaaatgtaaccaac
ttgggcaacgatattttgccagacaagtactccagtgatgaagatagtgaaggcgaactg
gagcaaaacactcagaagggcttttctagatatccgtacaatatcttgaaagatgacgat
gtaaagaacaagtctaatctgaagactatcatcggcaaaagtgtggaacttactgaagaa
gtagaagaagaaagttctataaaatacaacaaagacggctactggtcgtctccttctatt
gatgagctctcttccatgtctttggaagagttatcgtccatagataacttcattcttgga
agaaagggatttggacaactagcctacaatttccctgtggacttgtctcttacaatgcaa
agtgctcagtccaatagagtactgttggaaaaagagctttttggcaataccttccaactt
gaaagaatgattgttcttctctatactaatgatgctcataataagccacctataggtatg
ggactcaatgttcctgctacagtgactttagaaggtgcaaagcccagggagggcgttcca
gtaggagattacatcaagcaattgaagctccagaaaggtatggagtttgtcacctatgac
cccatcacttttgtatgggtgtccaaagtcaaacatttcagtgtgtggggtttgattgaa
gatgatggaactgaactctctaagaagtacatggaaatgaagagaaaacaagacgaatat
gaagaaactgctgagttggaatactccagagtctacgagaatcgtgagtaccttcaggaa
atcaagaaacagaagcttctcaatcagaccatagctgtacccggtggttggaaatatgcc
aatactacacagcaaagtccgttagatttcaagagaaagcttcttaacaatgagatcaac
agccaattggatttacatagaaaggaaaatgttgttaatgagttgtcacatgtcagcgat
ataacacttgactcagatgaaaacgacagatctgtctcaccagacagtattgtgtttgct
gagaatgaagacttgtccgatggtggaaacaactttgactatttaaaacaattggtgggt
aacctccctgccgatgttgatatggatgagatcgtcaatgagaaggcttatgagccagaa
attgttaacgatgccgtattcgatagcattcagatttggcccaacttggctacttcagaa
gattggattgtccagttgaagttggcgaatgacatgaacagtgccttggctcagtctttt
ggagactctgaaggagccaagaaacaaatctcccctgaagatatcgatgccgtcttgttt
gctgatttcaatagagaatcgttaaagaaggatcaaatttcaactccaagcagagacaac
aaattggctgtgattgaagatattgaaccacaggttgatgacgagattttccccaacaac
atttctagaatcctctatgattttttgaccaaaacaattattgaaaccaggactaactct
taccctaaagttgtagagacatctggtttgtcgtttgtcagtctcattactaatgatctg
gtgaaggatgagaaacaactcttttcactcggtgcctcacttttcgacaaattgtccacc
gagaagtataccgaacttgaacaaaatatagtgaactacttgaatgaaacaggaaggaag
agagctttcaatatttggttgaaagagtacaattcgaacgatattgagattctcattagc
caagttcagtccaattccttggaactcatttttgtatatgtttgtgctggtgacttgaag
gaagccatcaacatagccctagaatctaacaattcgcatttgtctgttatcttgacctta
acagactccaatgatgatgcggtgaggggcatcgctagtcaacaactaaaggcatggaga
gactcttcatcattacacttgatacctagtcctgttgtcaagatctataagattttgtca
ggcgaatttgatgactttgtcaatgaattgccctggaacatcaacttggctttgaaatta
tactatggagatgaaagtgccaagttgcatgaagttcttaatgattcacttgagagatct
gataatgctgcctctcaagctagtgaagttattgatattttgcaagtttactgcagtttc
caaaccgatggtaaggataaagcgctaaagaaattgatcagctcatcgttgaatagcaag
ttgaagtggtttttcttcaaagtgatttcttcagatgttgtcgatactacgtttgatggc
atttccttgtcgtttgggatgtatttggagagtgtcaagttgtggaaagaagcaattttt
gtctactcccatttgtcggatgacgaacagagcaaaaacaaattgagagatgtagtgatt
tctagtatcaagaacattaacagtgacgacaagaattatttggtctcggtgttgaaggtg
cccactggtttgctttcagaagctattggcatcagcaaaggagctgatggtgaccactgg
ggtgaatgcgaagctttcatagatgcccagttgtgggagaatgcacatttcgtgatcata
acgaagttgggtccgcatgtggtcatttccaagaacaagaacgcagaaaacagcttgctt
gagttgatttctcgctttccccagaaaggtacgattatctctacatggaacagcggggcc
ggaatctatgaaaagtacattgccttgaccagagatgagaacaacatagaagtgttaagg
ttcttgttgtcgaatattcccttagctaaggaaatctctagctttgaaaccaagagtgct
ctcaagatcatttctagaaaggttggggatgttgctatagaaaagagaagcgatgttgac
ggtgttgaaggtaaggtccagcagttatatcttggtgaaagtgagaagaaatacttttcc
gtgagactccagacagataatgtatga
DBGET
integrated database retrieval system
