Scheffersomyces stipitis: PICST_81113 Help Entry PICST_81113       CDS       T01023                                  Symbol SEN1 Name (RefSeq) DEAD-box type RNA helicase   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pic  Scheffersomyces stipitis Brite KEGG Orthology (KO) [BR:pic00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pic03021]     PICST_81113 (SEN1) Enzymes [BR:pic01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PICST_81113 (SEN1)     5.6.2.5  RNA 5'-3' helicase      PICST_81113 (SEN1) Transcription machinery [BR:pic03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      PICST_81113 (SEN1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 AAA_30 AAA_23 GvpK Motif Other DBs NCBI-GeneID:  4851719 NCBI-ProteinID:  XP_001386840 JGI:  81113 UniProt:  A3GHH0 LinkDB All DBs Position 1:2645900..2652656 Genome browser AA seq 1999 aa AA seqDB search MPSSYIPKPEEFDALVASIQQSHHEPGNSSNQEVVLKKCITYLFRYGQKDTHLFCDPSMY PVTVHIMILFSFPNNGVLEKLKPMLADSLWKCDNCLRCFNLGKSTLRIDFAANRQIEISK VNQFIGVIVQWETQVFGQEIQTVAAALKDGKFPSLTSSSPIDFAIRACLYGPQILRNNTG VRDDFMTIISNIQAGTLSYPYPELLLPGAFYLLFEGQTQQKSWAAQWLQYLKEKQYQLTA TTVSPTLVDEFSVHLYRIQDANFFSPHASIDFWTVVHSLLELVDNEAFMNHFNVPPDINL MRQYTKLRLYPILRLFMNNLLANLKDTLPILLKVLSKLLAKYHTAFWGIVAPITYSQVLD SILVNPEFNRLLFASAVEEPENSKIDDSVQSNILSWIYPFLYSLNETNNQTSSRKLANYL LKQVASITDTSILSERLKKELLDNYALRILSLSFQFNVTSCDFGSKNYELSLLKIRDTRA TIENNAAIIVSNAYSSSKIARRLIFTALSYDVALLAHSTSLLMAGNIPTSFDSFPLLWDA LNKSSTFSVNIGTTKLLGSLSKVNSVVKFSKRKNEVLPKQMAEARAQHNENVTSIFTTLS SCLAKVSLSNPSELKKVFSEESIQIAFWSCLFSPLITESATDVLYQVFDDVVGRYEAFQG LLETHLQITVNAIDQSVQRMTQLAAYEPSPRAIRILMDVVKGLTDPLTGILSSSEQVQGS GDSIVTFWSTCWSFLIMVYQKTLTWANQFHLEELIEFTRDTLDLSHFLLDNFRLVADSIP GSSGEKSHSLFRKFMNAFHYMIVWLRLGDASLLNSCVELVFKGFELAKDLDFTIDVAFIE TFAKFGAKAKKFNNKLTEQQRSEILSKAREFDEGLVDKVITETALQRGKAKKDSESGTST PEPPAFAYQNQAKQPRQQTLGRFGVVTTEAPVAPAPKGFKSSSLDSIRKDLVSSRATVKP SVIPAVNPAPPRPAGFNSKKQPAVGRSLNQLKKKRVDSDSSEDELDTDTSDLFVDKSKKK VTVTEIDMYGRPVAGRPQKSKVDIAKREEENMRNRLNVSLKPLYSTILKWNYNSNDSFPT GDRDSYKEIKSQYDDVKDYVKTTEPLLMLECWQGIQSAKQTGQEKPFEILVGSRTSVDGF FDVYGSVKKSVIADRKVGDSDLLVLGFVQEEFSTPEALGHYLKAPTTRTCLAKVREIKSA NPDYNDITVRVYPSGSMMGVLTPKSQIVAMRISQMVTIEREYTSLKGLQYYDLCDSILAA KPNEPVEISDAEAMKLLNIYDVNKSQAKAIIGSYNSEGFSLIQGPPGTGKTKTILGIVGY SLSQQVDEKIIIKIDQGNGNVISGNEKKPKVLICAPSNAAVDELVVRLRDGVRNSRGEHI IPKLVRMGRSDAINAAVKDLTLEELVEKELQAKAMNTDTSTDPNIRAEHSKCIEERDNLR RKLQTDSLSSKEIDELESALREINKKRTELGKQLDLQRERVSIAYRTREIERRNAQAKIL NDAQIICSTLSGSAHDFLANMGITFDQVVIDEACQCVELSSIIPLRYGCKKCIMVGDPNQ LPPTVLSQAAASFNYEQSLFVRMQQNNPNSVYLLDVQYRMHPQISAFPSAQFYQSRLKDG EGMAAKNERPWHSQYPLSPYRFFDIVSRHQRNELSRSLFNTGEARVALELVEKLMTLLPE DQFSGRIGIISPYKEQIKTLRDVFIKKYGYSITTQIDFNTVDGFQGQEKEIIIMSCVRAS DNGNVGFLSDVRRMNVALTRARTTLWILGNKESLMRNKIWNKLLTDATDRNCVSQAYPGF LSSASEQAPGKRKVVENRQGNATKRSKHIKNEGTVKPAQDKRNSAKANPHSGPKKIKSSI FGSSNPTTSGIPNSEPELIQLGNKPKKPVIYNAGGTKGINGKAISASKSGVLPPPSNSKN DTNSTINKNNTSHAEISLPPRPSSSGVLPQKPASQIPKARSGVIPGPKPNGVQPTKSGTI RPPTSAIFISQRKKPPPKR NT seq 6000 nt NT seq  +upstreamnt  +downstreamnt atgccgtcgctgtacatccccaaaccggaagagttcgatgcgctcgtagcatctatccaa cagtcccaccacgagccaggaaacagttcaaaccaggaggttgtgcttaaaaaatgtata acctacctcttccgctacgggcagaaggacacccacttgttctgtgatccctccatgtat cccgtaaccgtccatattatgatcttgttctcatttccaaataatggggtgctcgaaaaa ttgaagcccatgctagcagatagcttgtggaagtgtgataattgcttgcgctgtttcaat ttggggaaatcgactcttagaatcgacttcgctgcaaatagacagatcgaaatctccaaa gtcaaccagttcattggagtcattgttcaatgggaaacgcaagtatttggccaggaaatt caaacagtcgctgcggcactcaaagatgggaaatttccttcattgactagcagttcacct atagactttgctatcagagcgtgtttatatggcccacagattctacgcaataatactggc gtgagagatgatttcatgacaattatatccaacatccaggctggtaccttgtcctaccca tatcctgaattactcctaccgggcgctttctatctcctcttcgagggtcaaactcaacag aagctgtgggctgctcaatggctccagtatcttaaagaaaagcagtatcagcttaccgca actaccgtactgcctactttggtggatgagttcagcgtccatttgtatagaatccaggac gccaactttttctcgccacatgcctccattgacttctggacagttgtacacctgcttctt gaacttgtagataatgaagcattcatgaaccacttcaacgttccgccagatattaatctc atgcgacagtatacaaaattaaggctttatcctatattaagactcttcatgaataacctc ttggccaacttgaaggataccctacccatacttctcaaggtgcttctgaagttgttggcg aagtaccacacggctttctggggaatcgtagcacctattacgtactcacaagtgttggat tccattttggtcaacccagagtttaaccgattactctttgcttcagccgtggaggagcca gagaattcgaagatagatgattctgttcaaagtaatatccttctgtggatttacccattc ctttattcgttgaatgaaacaaataaccagacatcgtcgagaaagttagccaactactta ctcaaacaagtggcatccattactgatacctctatattatctgaacgtttaaagaaagaa ttgctagacaactatgcgttgcgtattcttctgctttcttttcagttcaacgttacaagc tgtgattttggtagtaagaattatgaactcagtcttctcaagatcagggatactagggct actatagaaaacaatgcggctattatagtttccaatgcctattctctgtctaaaattgca agaaggttaatattcacagctctttcatatgatgtggctctattagcgcactctaccagt ttgctaatggctggtaatattcctacatccttcgattcgttcccgttgctttgggatgca ctcaacaagtcttcgaccttctctgtcaatatcggcactacaaagttgcttggttcattg tctaaagtaaattccgtagtaaaattctccaagagaaaaaacgaagtgcttccaaagcag atggccgaagctcgggctcaacataatgagaatgtaacactgatattcactactctatcc tcatgtctagctaaggtgagtttgtcaaatccatcagagttgaaaaaggtatttctggaa gaactgatccaaattgccttttggtcttgtctcttttctcctttaattacagaatcggct actgatgtcttataccaagtctttgacgacgttgttggtcgttacgaggccttccagggt ttactagaaacccatttacaaataaccgtcaatgctattgaccaaagtgtgcagagaatg actcaattagctgcctacgaaccaagccccagagcaatcagaatactaatggatgttgtt aaaggtttgacagatccattgaccggcattctatcatcatcagaacaggtgcaaggttcg ggagattccatagtaactttttggagtacctgttggtcctttttgatcatggtgtatcag aagaccttgacatgggccaaccagtttcatcttgaagagttgattgagttcaccagggat actcttgatcttagtcattttctattagacaatttcagattggtcgctgatagtattcct ggttcgtctggagaaaaactgcattcattgttcagaaagtttatgaatgcttttcattac atgattgtttggctcagattgggggatgcatctttattaaattcatgtgtagagttggta ttcaaagggtttgaattggctaaagatttggatttcaccatcgatgtcgcctttatagag acctttgcaaaatttggagcaaaggctaagaagtttaacaacaaattgactgaacagcaa cgtctggaaattctttcgaaggctagagaatttgacgaaggcttagtagataaggtcatt acagagacggctcttcagcgaggaaaggcaaagaaagactctgaaagtggcacttctact ccagagccacctgcttttgcatatcaaaatcaagccaaacaacctaggcaacaaactctt ggaagatttggagtcgttaccacagaagctccagtggctccagctccgaagggcttcaag tcgtccagtttggattccattaggaaagatctagtgagttctcgtgcaactgtcaaacct tctgtcattcctgccgtcaaccctgctccccctagaccagcaggattcaattctaagaag cagccagctgtgggaagatctttgaatcaactcaagaaaaagagagtggactcggatagt tctgaagatgaattagacacagacacttctgacctcttcgtagacaaatcgaagaagaag gttactgttactgagattgatatgtacggaagacctgttgcaggtagacctcaaaaatct aaggtagatatagccaagagagaagaagaaaatatgagaaacagattgaatgtatcactc aaacctctctatagtacaattttgaaatggaattacaattctaacgacagttttccaaca ggcgatcgcgatagctataaggaaatcaaaagccaatatgatgatgtcaaagattatgtc aagacgacagaaccattacttatgttggaatgttggcagggtattcaatcggccaaacaa acaggtcaagagaaaccatttgaaatacttgtgggaagcaggactagtgtagatggtttc tttgatgtttacggttctgtcaagaagtcggtgatagctgatagaaaagttggtgattct gatttgttggtgttgggatttgtgcaagaagaattctctacacctgaagcccttgggcac tatttgaaggctcctactactagaacatgtttagctaaggtgagggaaatcaaatctgca aatccagattataatgacatcactgttagagtgtaccccagcggctctatgatgggcgta ttgactcccaaatcacagattgtagctatgagaatcagtcagatggtaaccattgaaaga gaatatacttctttgaagggtctacagtactacgatttgtgtgattcaattttagcagca aaacccaatgaaccagtcgaaatttcagacgccgaggctatgaagctactcaatatttac gatgtcaataagtctcaagcaaaggctattataggatcctacaatagtgaaggtttttcg ttgatccaaggccctcccggaactggtaagaccaagactattcttggtatcgtaggatat tccttgtcacaacaggttgatgagaagataattatcaagattgaccagggcaatggcaat gtaattctgggcaatgagaagaaacctaaggttttaatctgtgctccaagtaatgctgca gtagatgagttggtagtacgtttaagagatggagtgcgaaactcgaggggggagcatatc attccaaagcttgtacgtatgggtagaagtgatgctatcaatgccgccgtaaaggatttg acattggaagaattagttgaaaaagagttgcaagctaaagccatgaatactgatacttct actgatcctaatatccgtgctgaacatctgaaatgtatagaggaaagggacaatcttaga agaaagttgcagactgacagtttgtcttctaaggaaattgacgagttggaaagtgcctta cgcgagataaataagaagagaactgaattaggtaaacagcttgatttacagagagaaaga gtttctattgcatatcgtaccagagaaattgaaagaagaaatgcccaagctaagatcttg aatgatgcccaaattatctgctcgacgttatctggttctgctcatgactttttggctaac atgggtattacatttgatcaggtagtaattgatgaagcatgtcagtgtgtggagttatct tctattattcctttgcgatatggttgtaagaagtgtattatggttggggatcctaaccaa ttgcctcctaccgtattatcgcaagctgctgcctctttcaattacgagcaaagtttgttt gttagaatgcagcagaataatcccaactctgtgtacttgttagatgttcagtatcgtatg catcctcaaatttctgcatttcccagcgcacaattctaccaatctcgtttgaaagatggt gaaggaatggctgcaaaaaacgaacgcccgtggcattctcagtatcctctttcgccttat aggttttttgacattgtcagtcgacatcagagaaatgagctctctcgatctttattcaat actggtgaagctcgtgttgcattagaattggtagaaaagcttatgacgctattgcctgaa gatcagtttagtggccgcattggaattatatctccttataaggaacagatcaagactttg agagatgttttcataaagaagtacggatactctatcactacgcagattgatttcaacacg gttgatggattccaaggacaggaaaaggaaatcatcatcatgtcgtgtgtccgtgccagt gacaatggtaatgttggtttcttgagtgatgttcgtcgtatgaacgttgccttgactcgt gcgagaacaacactctggatattgggtaataaagaatcgttgatgagaaacaagatttgg aacaagcttctcacagatgctactgacagaaattgtgtctcgcaagcttatcccggtttc ttgagtagtgccagtgaacaagctcctggaaagagaaaggttgttgaaaacagacaggga aacgcaacgaaacgctcaaagcatattaagaatgaaggaactgtcaaaccagcacaagat aaaagaaacagtgcaaaggctaatcctcattctggtccaaaaaagattaagagtagtata tttggcagctctaatccaacaacatctgggatcccaaattctgagcccgaattaatccag cttggaaataagccaaagaaacctgtcatctacaacgctggaggtacgaagggtatcaat ggaaaagctattagtgcatctaagtccggagttcttcctcctccaagtaattcgaaaaac gataccaatagcactatcaacaaaaacaataccagccatgcagaaatatctttgcctcct cgtccttctagtagcggtgttttgccacagaaacccgctctgcaaatacccaaggctagg agtggagtcatcccaggaccaaaaccaaacggtgttcaacctacaaaatcaggaacgatt cgtcctccaacctctgctatatttattagtcaaagaaagaaaccacctccaaaacggtag

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