Scheffersomyces stipitis: PICST_81688
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Entry
PICST_81688 CDS
T01023
Symbol
TOM12
Name
(RefSeq) E3 ubiquitin protein ligase TOM1 (Temperature dependent-organization in mitotic nucleus protein 1)
KO
K10592
E3 ubiquitin-protein ligase HUWE1 [EC:
2.3.2.26
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PICST_81688 (TOM12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_81688 (TOM12)
Enzymes [BR:
pic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
PICST_81688 (TOM12)
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
HECT type E3
PICST_81688 (TOM12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
DUF908
DUF913
UBM
Pua-like
Motif
Other DBs
NCBI-GeneID:
4837043
NCBI-ProteinID:
XP_001382850
JGI:
81688
UniProt:
A3LNA3
LinkDB
All DBs
Position
2:complement(467670..477509)
Genome browser
AA seq
3268 aa
AA seq
DB search
MIVEKRDHLERMEMAKPMRSLIDDLTSCSIKELPAKLEANLKWEKPRGDLLHWVSVLNRM
DEIYEEIINKYDLENEFPRLQLFSQEEQTLICSCLKFTYILLDHCSDRQIYSSSERIFAL
LNTPTIDVRLHALEVAVLISEKYAQSSSSRYSAPKQIKNKVLQMARSYPPIVPPSYAKAH
QEDPKAEESDKPSVMGDHFNFIDTLSSKKKYPSKWKSLEFPYYKTVLVNDQKKSQQPGSD
RKKSEKTDKSDKSVHRSEGLSTFHLSEESVRKLTLEQIYDKASDSIPKDSWFEFGLVASV
TKAFNTRSYESIKLREKLLQIKCLAIGFVCCMCSSQFTSSRLFEAEPYIFSFLVDLVSPT
NDDKVSTQVYYAATRALECISSRKLWGSDIIRCMGGNVNHGILFQCIRHINKMVRSEDPI
YFERGYIHFFNMLGNLINSKNLIPRLTSGGILNDLMSFFDLRTKYRWSCSAAVHLTSNYL
KASPDSFEEFVNKDGFNLLINTIRYEVNFALQNPDYDGGAPTDAVVHYSISFRQANYIKN
LMKLVSDLIQSDSGDRLRNLFDSPLLESFNQVLLNPEIFGPLILSTTIDSVFFIIHNEPT
AFSILNEAKVVDTILDNFHTLFIPSGNLLVSLPEVIGAICLNNDGLKKVKEKGTISTFFQ
LFQDLECSKELVRSDMATNMGCSFDELGRHYPSLKPVILDATKKLIEDIVPYANEKMAGA
RFYTSSKGALYYSEEEEIIENEEGKNEIENWDSTDMAYILDNVFFFLGGLLQDSGQWGTD
SMKVIPFQLWLNFLTMPNAPFDYITSNGVSTLLGILKYFDDEGREYGFPELFSRLKEQLE
NPIIQEFLNFDDPSVSFFSRFEEEEEMGTMFIQEFNILHTLLYIMTEIYVNPISLFHERF
QQVLNVFGGTGLSTVTDVGLLLKRVVLEETIIRTNLPLEVCKQTERARSVAPEIPPLPIC
ASEPSSKSLKQDFTSSKFKNTLQLRTFNHNFQTYTSSIFCSLGRVCSSKRPDFALTSWRR
DAVALTIEVGRVLSTIFDVQIDNEYYWECYVLNIATVVLYSLTLRDRIKDSLYTSLAISL
FQNGFFEKLKDFAHRLWMKILQIEPEEMKKTKEYSYISRDESSVVKNALNSSLAIFVKCV
NTESFSNIPSAKLYFHTGYGKDADNRVTCALLVQIRLVALEFFQSIIGTQVLETSGLVDS
RWGHPENIPSPVMEQVISIAKHVYLGRKETLDAEFIPLHVSNVSPPAEQVSYLVSLGMTR
SEADHYFRHLQDVRDIANKKWPDCPQFDISEEQWEKYGQMIREENANFDLTFPTYRKSSE
LRELRKSGKNSLVVEFLAIAKQFPRTVDAINEFFLTIFVDVQEVVGKIFESIVYLVDIQN
DKGQNLAVSIHLLQLLLRNERWSRSSGPIYEKFATFIASEIENHGELINEDYFSHSLTLF
EQILVFRDFPVPEPTEYNEIKYNDIVLPFVIDEEKNSQIFEGILNLKNFTSMTSVIAVTR
ILVLYARNETYVMRIIKSDLFKELITLPKLLSKNVAGVELLKTPLVILIRRCLETTDVLH
SHFAEEVRSQFGSSFKRTKDLRSFLREAAPCVMRNPEAFVDYISTCIRLEGYDGHPSFFE
DKLPIVRIKTQTVEDVEMSEADEQKPVEEQKVLGSSGVMYILLKNLMEAVRSDWTTDTTE
ESNESVVTGTGNYNYICFLVKTIAELLGSYKQSKLEFLTFSRKPNTDEKVKPRPTALNFF
IHQLIPKHSLEKPSVIELSRRSMVSALAKLAITSLVSTPLLTEKTVQTIKDEDIEMSYIR
KYFVEILSRIFKDTANSSAVNTLKYGKLADLFELCSSVISTKYREEGGLQLDSEGTKWDI
FFITKALLEKQIPGQITSIVADLDLNYPDIDKVIKASLKTVTAIAKAKVEDSEVHEGEHQ
GDKEDDDIVPEEVDDREETPDLFRNSTLGMYDVDFDSDEEEDELDYFEEGPLEVLMSGED
ISASEDSSGLSDLDSDMEDEDIEDGYQEVEDINQDVSEDELNEDLDSEGSIDDIEIIDEL
DLGSHSDRGDNETEEGDNESTDASDFYDFEDDGEVSEYDSEVLDGWIEEFEREDDSANEG
DESDLLARLGRNIMDGTRRRSRNADDNDNESSGSISDSEGDDLEFNPSNTNRSVLDSNGF
PSPALAVLLDNFFRDADFAVQVNGIETRFDGNRDGSITRYFENVMRNRHKSDSDPVSHIH
IKSVKDRWNDYLRIFYPNKNKDAILFRAIPGIVNRIESDSIDLFRRNKEEADRKRKERED
KRRQQEEEERKRKEEEAHERELHATNTTPHEPVIVRIADREVDISGTDIDPEFFEALPDD
MREEVFTQHVRERRANATSTGSDAREIDPDFLNALPDQIRDEILQQEELARDYGIHERLD
SGESEDEQEEWYEEPRFYSRNEETEETKKPKSRKVFYTPLVDRQGVSALVRILFAPLTIN
QRENVFHTLQYLCYSKQTRLEVMSMLIAILHECFTNQRTIEKIYAQICSRASGSKEIKKH
SHLPVGSTTISIGIQIIEAVDYLLERNTHLRYYILTEHENPFILKKVNKKLKLKDFSKEY
KYSINYLMMLLENNLVKNDQTFMDILARVLQISTRPLHVLQKLESEGEKNEKKQAPPFPP
PVIPNSNFRQIIKILTANECSNTTFRRTISAMQNLSVLSNAQNIFSLELSEQAAALGLSI
VGDLKSLTTELTQSTSFNTESKSFGKFSAASSDQAKLLRILTALDYMFESREKDRDIESD
AAALGKLGEIQELTDLYKKLGLGNLWDALSDCLRELEDKQDLANVATALLPLIEALMVVC
KHSKVRELQIKDVVKYEAKKIDFTKEPIERLFFSFTDEHKKILNQMVRTNPNLMSGPFGM
LVRNPRVLEFDNKKNYFDRKLHLEKNENSKLSINVRREQVFLDSYRSLFFKSKDEFRNSK
LEINFKGESGVDAGGVTREWYQVLSRQMFNPDYALFSPVASDETTFHPNRTSYVNPEHLS
FFKFIGRVIGKAIYDNCYLDCHFSRAVYKRILGRPVSLKDMETLDLEYFKSLMWMLENDI
TDVITEDFSVETDDYGEHKIIDLIPNGRNIPVTEENKHDYVKKVVEYRLQTSVAEQMDNF
LIGFHEIIPKELVAIFDEQELELLISGLPDISVIDWQSHTTYNNYSPSSLQIQWFWRAVK
SFDNEERAKLLQFATGTSKVPLNGFKELSGANGTCKFSIHRDYGSTERLPSSHTCFNQID
LPAYETYETLRGSLLLAITEGHEGFGLA
NT seq
9807 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagaaaaacgggaccacttggaacgaatggaaatggccaagccgatgcggtct
ttgatcgatgatttgaccagttgtagcatcaaggagttgccagctaaattggaagctaac
ctcaagtgggaaaaacccaggggcgatctcttacattgggttagtgtattgaaccgaatg
gacgaaatatatgaggaaatcatcaacaagtacgacttggaaaatgaattccccagacta
cagctcttctcgcaagaagaacagacccttatatgttcctgtttgaagttcacgtatatc
cttcttgaccattgctctgacagacaaatatattcaagctcagaacgtatctttgccttg
ttgaatacgccaacaattgatgtcagacttcatgctttggaagtagcagtgttgatttct
gagaaatacgctcaatcctcttcttctagatactcagctcccaagcaaatcaagaataaa
gttctccaaatggcgaggtcttatcctcctatagtccctcctagttatgcaaaagctcac
caggaagatcccaaagctgaggaatcagataagccctcagtgatgggagaccactttaat
ttcatcgacacattaagttcaaaaaagaaatatccttccaaatggaagtctctagaattt
ccgtattataagacagtcttggtgaacgaccagaaaaaatcccaacaaccaggatctgat
agaaaaaagtctgagaagactgataaatctgataagtcagttcatcgcagcgaaggttta
tcgactttccatttgtcagaagaatctgtacgcaagcttactctagaacagatatacgac
aaggcatcggatctgattcccaaagattcgtggtttgaatttggattggttgcgtcagtt
acaaaggctttcaacactagatcttatgagtctatcaagcttcgtgaaaagttgcttcag
atcaagtgtctagcaattggctttgtgtgttgcatgtgttcaagccaattcacctcttct
agactttttgaagctgaaccatacattttcagtttccttgtagacttggtgctgcctacc
aatgacgacaaggtttctacccaggtctactacgccgctaccagagctcttgagtgcatt
tcttccaggaagctctggggaagtgacattattagatgtatgggaggaaatgtcaaccat
gggattttatttcaatgtataagacacataaacaagatggtcagaagcgaagatcctatc
tacttcgaaaggggatacattcatttcttcaacatgttgggtaacttgattaattcaaag
aacttgatccccagattgacctctggaggcatactaaacgacttgatgtcgttctttgac
cttcgtacaaagtacaggtggtcctgttcagcagctgtgcatttgacttcaaactacttg
aaggcttcaccggactcatttgaagaatttgtcaataaagatggtttcaatcttcttatt
aataccattaggtatgaagtaaactttgcattacagaatccagattacgatggtggcgct
cctaccgatgcagtagtgcactacagcatatcattcagacaagccaactatatcaaaaat
ctcatgaaattggtttctgatctcatccagtcagattctggagacagattgcggaacttg
tttgattcaccattattggagagtttcaatcaggttttacttaatcccgagatctttggg
ccgttgatcttgtccacgacaatagattccgttttcttcattatccacaatgaacctaca
gcattctctatattgaacgaagcaaaagtggtggatacaattttggacaattttcacacc
ttatttataccttcaggcaatttgcttgtttctctacctgaagttattggtgcaatctgt
ttgaacaacgacgggttgaagaaggtgaaggagaaaggaacgatatccactttctttcaa
cttttccaagatctcgaatgtctgaaggaattagtcagatcagatatggccactaatatg
ggctgttcttttgacgagttgggaagacattacccatctttgaaaccagtcatattggac
gctactaagaagttgattgaggatatagttccgtacgcaaatgaaaaaatggctggtgcc
cgattctacacttcttctaaaggagcactttattacagcgaagaagaggaaattattgaa
aatgaagaaggaaagaatgaaattgaaaactgggactccactgacatggcatatattttg
gataatgtgtttttcttcctcggaggattgttacaagatagtggccaatggggtacagat
tctatgaaggtgataccgttccagctttggttgaatttcttgactatgccgaatgctcct
tttgactatatcacctctaatggagtttctacattgttgggcattttgaagtattttgat
gacgagggtcgtgaatacggattccctgagttgttttccagattaaaggaacaattagaa
aatcctattattcaggaattcttgaattttgacgaccccagcgtctcctttttcagtaga
ttcgaagaggaagaggagatgggtaccatgtttatccaagagttcaatatcttgcatact
ctcctctacatcatgaccgaaatctatgtaaatcctatatctctattccatgaacgtttt
caacaagtcttgaatgtttttggtggaacaggattatctacagtgactgatgtaggctta
ttgttgaagagagtggtgttagaagaaactattattcgcacgaatttacccttggaagta
tgcaaacaaacagaacgtgcacgatcagtcgctccggaaattccaccccttcccatctgt
gctagtgaaccttcttccaagctgctcaagcaggattttaccagttctaagttcaagaac
actctccagttgaggactttcaatcacaatttccaaacatatacttccagtattttctgt
tctcttggtcgtgtttgtctgagcaaaaggcctgattttgctttgacactgtggcggaga
gatgctgtagctctaacaattgaagttggtagagtcttaagtacgatctttgatgtccaa
atagacaatgagtactattgggaatgctatgtgttgaacattgccactgtcgtcttatac
tcgttgaccctacgggatcgaatcaaagactcactttacacttccttggctatttcattg
ttccagaatggattctttgagaaattgaaagatttcgctcatcgcctatggatgaagatc
cttcagatcgaaccagaggagatgaagaaaacgaaggaatattcctacatcagtagagac
gaaagtagcgttgtaaagaatgccttgaatctgctgttagccatctttgtcaaatgcgtt
aatactgaaagcttttccaatataccttctgcaaaattatattttcacactggatacggt
aaagatgctgataacagagttacttgtgcattactagtccaaatacgtttggtagcattg
gagttcttccagtcgattattggaacgcaggtccttgaaacctctggattggtcgatagt
agatggggacatcctgagaacattccttctcctgttatggaacaggtaatcctgattgcc
aaacatgtgtatttgggtagaaaggaaactttggatgctgaattcatcccattacatgtt
agcaacgtttctccgccagctgaacaagtttcttatcttgtttcattaggtatgacgaga
ctggaagcagaccattacttcagacacttgcaagatgtgagagacatagccaataagaaa
tggccagattgtccacaatttgatatttctgaagagcaatgggagaagtatggtcaaatg
atcagagaagaaaatgccaacttcgatcttaccttcccaacttacagaaagagttccgag
cttagagaattgcgtaaaagtggcaagaacctgctcgttgtggaatttcttgctatagct
aaacagtttccaaggactgttgatgctattaacgagttctttcttactatatttgttgac
gttcaggaagtagttggtaagatcttcgaatccattgtatatcttgtagatatccagaat
gataagggtcaaaatttggctgtatccatccatttgcttcagttactcttgagaaatgaa
agatggtctcgttcaagtggtcccatctatgaaaagtttgccactttcatagctagcgaa
atcgagaaccacggagaactcataaatgaggattacttctcccatagtttgacccttttt
gaacaaatccttgtattcagagattttccagttccagaaccaactgaatataacgaaatc
aagtacaatgatatcgttttgccgtttgttattgacgaggaaaagaattcgcaaatattt
gagggaatcttgaatttgaaaaattttaccagtatgacatcggttattgcagtcacaagg
atcttagtcttatatgccaggaacgagacttatgtcatgagaataatcaaatctgatttg
ttcaaggagttaataacacttcccaaacttctttctaagaacgtagctggagtggaattg
ttgaagacacctttggtaattttgatcagaagatgccttgaaacaactgacgttttgcat
tctcactttgcagaagaggttagaagccagtttggctcttcgttcaagagaacgaaggat
cttcgttcgtttctaagagaggcagccccttgtgtcatgcgcaacccagaagcttttgtt
gactatatttctacctgtattcgtcttgaaggctatgatggccatccgctgtttttcgag
gataaattgcccattgtaagaataaagacacagacagtggaagatgttgagatgtcagaa
gccgatgaacagaaacctgtcgaagaacaaaaggttctagggtccagtggggtcatgtac
attcttttgaagaacttgatggaagctgttaggagtgactggacaactgatacaactgaa
gaatcaaacgaaagtgttgttactggaactggcaactacaactatatctgtttcctcgtc
aaaacaatagctgaacttcttggttcgtacaaacagtctaagttggaatttttgactttc
tccagaaagccgaatactgatgaaaaagtgaaacctcgtccaactgctcttaatttcttt
attcaccagctcatacccaaacatctgcttgagaagccatctgtcattgagctttctaga
aggtcaatggtgtccgctcttgctaaattggcaattacctctctagtgtcaacgcctctt
ttgactgagaaaactgttcaaaccatcaaagatgaagatattgagatgtcttatatcaga
aaatacttcgtagagatcttgctgagaatatttaaagatactgccaatctgtcagctgtg
aataccttgaagtacggtaagttagctgacttatttgagctttgtagttcggttatctca
acaaagtatcgtgaggagggtggtcttcaattggattctgaaggtactaaatgggacatc
ttcttcatcaccaaagcactcttagaaaaacagatacctggacaaatcacctcgattgtt
gctgacttggatttgaactatccagatatcgataaggttatcaaagcttctttgaagact
gttactgcaatcgcaaaggcaaaggtggaagattccgaagttcatgaaggtgaacaccag
ggagacaaagaagatgatgacattgttccagaagaagtggacgacagggaggaaactccg
gatttgttcagaaactccaccttgggcatgtatgacgtggatttcgattccgatgaagaa
gaagatgagttagactactttgaagaaggaccattggaagtgttgatgtctggtgaagac
atttctgcttctgaagattcttcaggtctttcagacttggactctgacatggaggatgaa
gatattgaggatgggtatcaagaagttgaagatattaatcaagatgtcagtgaagatgaa
ttaaatgaagacttagattcagaaggcagtattgatgacattgaaattatcgatgagtta
gaccttggttctcacagtgacagaggggataatgagactgaagaaggagacaacgaatcc
actgatgcttctgacttctacgattttgaagatgatggggaagtcagtgagtacgattca
gaagtacttgatggctggatagaggagtttgaaagagaagatgactcagccaatgaaggc
gacgaaagcgaccttttggcaagactaggccggaacattatggacggtacgcgtagacgt
agtcgtaatgcggatgataacgataatgaatctagtggaagcattagtgacagcgaaggt
gacgatttggaatttaatccttctaacacaaaccgctcagtgctcgatagcaacggtttt
ccatctcctgcgttagctgtgttattggataatttttttcgtgatgctgattttgctgta
caagtcaatggtatagaaacacgctttgatggaaatcgcgatggaagcatcacgcgttat
tttgagaatgtgatgcgcaacaggcataagtctgattcagatccagttagtcacatacat
atcaaatcggttaaggatcgttggaatgactacttgaggatcttctatcccaacaaaaat
aaggacgcaattttatttcgtgctattccaggcattgtcaacagaattgagagtgacagt
atcgacttgttcagaaggaacaaggaagaagctgatagaaagagaaaagaaagggaggat
aaaaggagacagcaggaagaagaagaaaggaagagaaaggaagaagaagctcatgaacgc
gagcttcatgctacaaacacaactcctcacgaaccagtgattgtccgtatagcagataga
gaggttgacatcagtggaactgatatcgatccggagttctttgaagctttgccggatgat
atgagagaagaggtcttcacgcagcacgtacgagaaagacgagctaatgctacaagcacc
ggttctgatgccagagagatcgatcctgattttctcaatgctttgcctgaccaaataagg
gatgagattcttcaacaggaagaattggccagagattatggaattcatgaaagattggat
tctggtgaatcagaagatgaacaggaagaatggtacgaggagcccagattttattcaaga
aatgaagaaactgaagaaacgaagaaacccaagtcaaggaaggttttctatacacctttg
gtagatcgtcaaggggtttcagctttagtgcgtattctctttgcacctttgactatcaac
caaagagagaatgttttccatactttgcagtacttgtgctacagcaagcagacaagattg
gaagtcatgagtatgttgattgcaattttgcacgaatgttttacgaatcagcgcacaata
gagaaaatctacgctcagatttgtagtcgtgcttctggcagcaaggaaatcaagaagcac
agccatcttccggtaggctccactactatttcaattggtattcagatcattgaagcagtg
gactatttgttggaacgcaacacccatttacggtactacattcttaccgagcatgaaaat
ccgttcattttgaagaaagtcaacaagaagttgaagttgaaggatttcagcaaagaatac
aaatactccatcaattacttgatgatgcttcttgaaaataacttggtaaagaatgaccag
acgttcatggatatacttgccagagtattacagatctcgactagaccattgcatgtattg
cagaagttggaaagcgaaggtgagaagaatgagaagaaacaggctcctccatttccacct
ccagttatccccaacagcaatttccgtcaaatcatcaaaattttaactgctaacgaatgt
tccaatacgactttcagacgaaccattagtgccatgcaaaacttgtcagtattgtcgaat
gctcaaaacattttttcgttagagctttcagaacaggctgctgctttgggtctatcgatt
gttggagatttaaaatctttaaccacagaactcactcagtccacttcgtttaatactgaa
agtaagtcatttggcaaattcagcgcagcgtcttcggaccaagctaagttattaagaatt
ttgacagctttggattatatgtttgaatcgagagaaaaggatagggatatagaaagtgat
gctgctgctcttggaaagttaggcgaaattcaggagttgactgacttgtacaagaagctt
ggacttggtaacctttgggatgcactcagtgattgtttgcgtgaattggaagataaacag
gatttggctaatgtagccacggctttattgcccttgatagaagcattgatggtggtctgc
aagcacagcaaggttcgtgaactacagatcaaggatgtagtgaaatatgaagccaagaaa
atcgatttcaccaaggaaccgattgagagattgttcttctcattcacagatgagcataag
aagatcttgaaccagatggttagaactaatccaaatcttatgagtggtccatttggcatg
ttggttagaaatccgcgtgtattggagtttgacaacaagaagaactactttgatcgcaag
ttacacttggagaagaatgaaaactcgaagctctctatcaacgttcgccgtgagcaggtc
ttcttggattcgtatagatctcttttcttcaagtctaaggatgaattccggaactctaag
ttggaaatcaacttcaagggcgaatctggtgttgatgctggaggtgttacccgtgaatgg
tatcaagtattgtccagacaaatgttcaatccagattatgctttattttctccagttgct
tctgacgaaactacattccatcctaatagaacttcgtacgtcaatcctgagcatttgtcg
ttctttaagtttattggaagagtcattggtaaagctatatatgacaattgctacttggat
tgtcatttctcacgtgctgtctacaaacgtatcttgggccgtccagtatcattaaaggac
atggagacgttggacttggagtacttcaagtcattgatgtggatgttggagaacgatatt
accgatgtcatcactgaggacttctcggtagaaacagatgactacggtgaacacaaaatc
attgatttgattcccaatggaagaaatattcctgtcacagaagagaacaaacacgattac
gtaaagaaagttgttgagtacagattgcaaacttcagttgctgaacagatggacaacttt
ttgattgggttccatgaaataatccccaaggaacttgttgccatctttgacgaacaggag
ttggagttgttgatttcgggcttgccagacattagtgtcatcgactggcagagtcacaca
acttacaataactactctccgtcgtcgttgcagatccaatggttctggcgtgctgtcaag
tcgttcgataatgaagaaagagccaaattgcttcagtttgcaactggtacttccaaggtg
ccgttgaatggtttcaaggagttgagtggagccaatggaacatgtaagttcagcatccat
agagattatggcctgacggagagattgccatcttctcatacttgtttcaaccagatagac
ttgcctgcgtacgagacatatgaaactttgagagggtcgttgttgctagccatcaccgaa
ggtcatgaagggtttggtttagcatga
DBGET
integrated database retrieval system
