KEGG   Scheffersomyces stipitis: PICST_81799
Entry
PICST_81799       CDS       T01023                                 
Symbol
CDH1
Name
(RefSeq) substrate-specific activator of APC-dependent proteolysis
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pic  Scheffersomyces stipitis
Pathway
pic04111  Cell cycle - yeast
pic04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PICST_81799 (CDH1)
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PICST_81799 (CDH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pic04121]
    PICST_81799 (CDH1)
Ubiquitin system [BR:pic04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     PICST_81799 (CDH1)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_1st NBCH_WD40 eIF2A Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_SCAP WD40_RFWD3 Ge1_WD40
Other DBs
NCBI-GeneID: 4837081
NCBI-ProteinID: XP_001382788
JGI: 81799
UniProt: A3LMW8
LinkDB
Position
2:complement(125476..127698)
AA seq 592 aa
MSNNSNLNSSSSRNTSQHINIPSRGNNNNNTINVFETPRSPSRSTRSLDPPKLNDAPILP
STSPRRRNNKSIFSDRYIPNRTGIDLQAAFSLSNEEVIPDLRSNNADNEIEIRKEEEANR
TFSTVLKAELFGDNVPMATANLSSGLSSSRKTLGKPNTIRPSSSSNGLQSSTRSIADGGT
GSSGSTSNSHNDSSPSSNNNNGNTINGGSNLHDVDDVTRTPRRKTNLFTYQSPQKSRPIS
RDLQQELYSLSPVRQESQKLLLSPQKKPRSISKVPYRVLDAPELSDDFYLNLVDWGQQDI
LAVGLGDSVYLWDGATQSVDRLCNLANKDKVTSLNWIGSGTHLAIGTSKGLVEIWDATKI
KCVRTMTGHSLRVSSLAWNEHILSSGSRDRSILNRDVRVENHYVNKFESHKQEVCGLKWN
VEENKLASGGNDNKLFVWDGLNPKPLHQFTDHSAAVKAIAWSPHQRGILASGGGTADKTI
KTWNTLTGNLVHDVNTGSQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGH
TYRVLYLSLSPDGETIVTGAGDETLRFWNVFEKNKQNEPPSSVLLDAFSQLR
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagcaataatagtaatctcaatagtagcagttctagaaacacctcacagcatatcaat
atacccagccgtggcaacaataataacaacaccatcaatgtgtttgagactccacggtcg
ccttccagatccacacgcagcttggatccacccaagcttaacgatgctcccatattgccg
tcgacttctccaagacgtcgcaacaataagtctatattcagcgatagatatatccccaat
agaacgggcatagatctccaagcagcattcagcttatccaacgaagaagtgatacctgat
cttcgtagtaacaatgctgacaacgagatcgaaatccgtaaagaagaagaagctaaccgg
acgttttcgacggtgttgaaggcagagctattcggcgataatgttccgatggccacagcc
aacttgtcgtcaggactttcgagctctaggaaaactttaggaaaacccaatacgattagg
ccgagcagttcaagcaacggtttacaatcgtcaactcgttccatcgctgatggtggcact
ggctcttcgggatcaacatccaactctcacaacgacagctctccaagtagtaacaacaac
aatggcaataccattaacggaggctctaatttacacgatgtagacgatgtcacgagaact
ccacgtagaaaaacgaacctttttacctaccagtcaccccaaaaatcacggcctatctcg
cgtgatctccagcaggagctctactcgttgtctccggtgcgacaggaatcgcagaaactt
ctactttctccacaaaagaaacctcgcagtatctccaaagtgccgtacagagtcttggat
gctcctgagctatctgacgatttctacctcaacttggttgattggggtcaacaggacatt
ttggcagtaggcttgggtgacagcgtgtatctctgggacggagctactcaatcagtagac
cgtctctgcaatctagctaacaaagataaagtcaccagtttgaactggataggttcagga
acccatctcgcaattggcacttcaaagggtctagtagaaatctgggatgccaccaaaatc
aaatgtgttagaaccatgacaggtcacagcttgcgtgtgagctctttggcatggaacgaa
cacatactatccagtggatctagagaccgaagcatcctcaatcgagacgtcagagtggaa
aaccactatgtcaacaaatttgaaagtcacaaacaggaagtctgtggtttgaaatggaat
gtagaagagaacaaattagccagtggtggcaacgacaacaagctctttgtttgggatggt
ttgaatcccaaaccgttgcatcaattcacagaccatagtgctgctgtgaaggctatagca
tggtccccccaccaacgaggcatactagcttcaggaggtggtacagctgataagaccatc
aagacatggaatactcttactggtaacttagtgcatgatgtaaatactggctcgcaggtc
tgtaatttaatctggtccaagaactccaatgaattggtttctacccatggctattcgagg
aatcagatcatagtgtggaagtatccttctatgcaacaaatagcccaattgacaggacac
acctatagagtcttgtacttgtcgttgtcaccagatggcgagactattgttactggtgct
ggggacgaaactttacggttctggaacgtctttgagaaaaacaaacaaaacgagcctccg
tcttcggtgttattggatgcatttctgcagctacgctaa

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