Scheffersomyces stipitis: PICST_81830
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Entry
PICST_81830 CDS
T01023
Name
(RefSeq) RNA polymerase II transcription initiation factor TFIIF middle subunit
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_81830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_81830
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PICST_81830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
4837660
NCBI-ProteinID:
XP_001382266
JGI:
81830
UniProt:
A3LMY9
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All DBs
Position
2:<173736..175033
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AA seq
402 aa
AA seq
DB search
MSAATSSIKTSPVKKSTESPSKTNGNKETEAGKTPNSEEVGEDPENSILSDPEDYLEEDE
TLDMNLTNGDQKIWLVKLPRYLAEKWAKTENLNGSQLGTVKIKKNSGGNGGKLQVKLVIN
KDLEESKGIPQEYDISMLNTQVRNSYVFSEENLKKFKQELTEVTQMPEQPSLQPLDKSNI
NNKKFQQKQPFKFFRVQKNGKDGKPVRKYIPFVKTIPKKTSLVGKICHDCQIIPSKHDSQ
YEKILSNRQNITQGPVRPKVTFLNEIPGVIQSNAGPSIKGNNTSVFLKSNPNKGKNAEGR
AIRMPKKDLLDLLFRLFEEYEYWSMKGLKERTRQPESYLKESLDSIANLIKKGPYTSKYN
LKPEYRRLRDAERAARLGLDVNEGDEKDDEEDDEDMDMEDVV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgccacttcatctatcaagactagtcccgtgaagaagagtaccgagtctcct
tctaaaaccaatggaaacaaggagacagaagcgggaaagactcccaatctggaagaagta
ggcgaggacccagaaaactcgattctttcagatccagaagactatttggaagaagatgag
acgttggatatgaatttaaccaatggtgaccagaagatctggttggtaaaattgccccgt
tatttggccgaaaagtgggctaaaacagaaaacctcaatggcagtcagttgggaacggta
aagatcaagaagaatagtggtggaaatggaggaaagttgcaagtgaagttggtgataaat
aaagatttagaagaatctaaaggaattccccaggaatacgacatatctatgttgaacacg
caagtacgaaactcgtatgtgtttagcgaggaaaacttgaaaaagttcaagcaagaattg
actgaagtaacacaaatgccagaacaaccttcgcttcaaccattagacaagagcaatatc
aacaacaaaaagttccagcaaaaacagccgtttaaattcttcagagtccaaaaaaatggc
aaagatggcaaaccagtaaggaagtatattccatttgtcaaaacaatacctaagaagacg
tcgttggtgggaaagatctgtcacgattgccaaattatcccttccaagcatgatctgcaa
tacgaaaagatcttgctgaatcgacagaatatcacccagggaccagtgaggccaaaagta
acgtttttaaacgagattccaggtgttattcagtccaatgctggaccctctattaaaggt
aacaatacgtctgtgttcttgaaatcgaatccaaacaagggtaagaatgctgaaggcaga
gcaatcagaatgccgaagaaagatttgttggatttgttgttccgtttattcgaagaatac
gagtactggtccatgaagggcttgaaggaaagaaccaggcagcctgagtcctatctcaaa
gagtccttggactcgatcgccaacttgattaaaaagggtccatacacttccaagtataac
ttgaagccagaatatagaagattgagagatgccgaaagggcggccagattaggactcgac
gttaatgaaggggatgaaaaggacgacgaagaagatgacgaagacatggatatggaagat
gttgtttaa
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