Scheffersomyces stipitis: PICST_82218
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Entry
PICST_82218 CDS
T01023
Symbol
VPS8
Name
(RefSeq) vacuolar sorting protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pic
Scheffersomyces stipitis
Pathway
pic04138
Autophagy - yeast
pic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PICST_82218 (VPS8)
04148 Efferocytosis
PICST_82218 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_82218 (VPS8)
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PICST_82218 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
zf_RING_Vps8_fungal
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_THOC3
zf-rbx1
zf-RING_2
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
4837187
NCBI-ProteinID:
XP_001382449
JGI:
82218
UniProt:
A3LP33
LinkDB
All DBs
Position
2:1214015..1218344
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AA seq
1335 aa
AA seq
DB search
MSPIIDSPRSSVGNLFDLPARSFSSPTPSDTSSHSSLTSPLRKQRFDDRSQTKISIALKS
HQINTSHHVKDSVDVHRHLKESDINEILKWSETSTITGIINSSDFIASHGSVNYTEPSSI
YIALGTNKGRIVVFNYHQGVEFILESQEQSDHHQQNSEISTIAFSSDSIFLAAGYTSGHI
RLWDLSSKSSSAFPGTISPYFTINPITLQDRFTKNHSGHLRNTPINQISFIADSHIQLIS
VDISGLVFYHNGIKKFLQKYFISQKILGKNDANITDSKYFIYGCSLLPLGSSHQITDQLG
VMAVITSNVLIIVSALSLNNSHTMHTVEHFKVGKSKQVMSSTQIMACLDWFPCMEVNNKT
INAKLAYSWNNVLNILEVDNSSFPSNLLSVVSDLKDKDKGIPKLPIKKVSRWNTTNKHDS
IVSVKWISSDILCVFIKEGSQPHGSLKVTALYLSNGILKRNSIKVFKHRLLALTDSDNIR
KLYIGRSLSWADVLLGLLSSGKYAEALSTANEFYNSANTGKLVLVGLPEDPSARFKLVRP
YLIQIMKESVPHLFSYGYENSHYFLTTYFSIISNLTREDSKEDLSYLLEMIFEKLDEKSI
FFDVLESYTLSGSISSLPPLILKQLVEHYVKTERGELLTEILCILDIKTLDIDLTIQLCN
QYNLRDCLIYIWNYLLDDYETPLVDFIKDFRNPEFLLKEDYLRAYSYMSFVLTGRQYPTD
RFIDGLKDIPIKESICNILFSSTTVTWPAHNGEELHADNEDTIFPYLFSFLKANSFEMLS
TLNEFFEEPYLNDIETKKLNRQYITDALLDIFEANEHLFTDEDRCQLAIFIGRNYAKYSQ
FIRLSESVLGRIINDLCGNTNVAISSDCELALQSLLPYYEPENDDLLYEKLTAAKYYSVL
INIYKSEGRYSKVLEMWLSKLMNDPSGEFQNESLSQVLENSFMLTKKPVDRLSLINVIIV
NFERFTAIDLDNFLVLISRFSPQLHHEALNIKDNVLMFKYLDELFHQSKSSLSDDPHLPN
LISKNIELHCIYDKTTIFKFVETWKEELVRDQDQFARTIQILKDNQQVDSVAELVVFQGH
YYEALKYILTFINSISASLDDEGLKSTFTKLLHQSMKICELAETYEEYDGDLILNEKMWL
DLIGNVVNMASIMQHNAEVHTFLNGCIHDCFRAISDAKLNTNKEQSFLTIFNKFLESSSD
NSTLANVRGILQENFVSYSYESEMLRISLSMLNQGIYKELKQIKMDNLSGWAIQQKLCAS
CGKIMWGPDVSQDNYSAWEDRQSAALYIMGSSLGTKFDNDKYHHCQLIFFKCSHGFHSSC
LESLGVSVACVICSS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctattatagacctgccgcgactgtcggtaggaaacttatttgatttgcctgct
cggtcgtttctgtcaccgactcctagtgatacttcatctcattcttcccttaccagtcct
cttagaaagcagagatttgatgatagatcccagactaagatcagtatagccctcaaatca
catcagataaacacttcacatcatgtaaaagactctgtggatgttcatcgacatttgaag
gagctggatataaacgaaatcttgaaatggtccgaaacttctacaatcactggaatcatt
aactcgagtgatttcatagccagtcatggctcagtaaactatactgagccttcatccata
tacatagcattaggaaccaacaagggacgaattgtggtattcaattatcatcaaggagtt
gagttcattctcgagtctcaggaacaatcagatcatcatcagcagaattcagaaatttca
actattgccttttcgtctgattccatatttttagctgctggatataccagtggtcatatt
cgactttgggacttgtcttccaagctgtcaagcgcctttcccggaactataagtccgtac
ttcaccatcaaccctatcacgttgcaggatagattcaccaagaaccacctgggtcatttg
cggaatacccctatcaaccaaatatcattcattgccgatctgcatattcagttaatctct
gtagatatatcaggattggtgttctatcataatggtatcaaaaagtttcttcagaagtac
ttcatctctcagaagatcttgggaaagaacgatgccaacatcaccgatagcaaatacttc
atctacggctgctctttacttcctttaggctcttctcatcaaatcactgatcagctagga
gtaatggctgtgataactagtaatgtcttgattatcgtatcagctctctcattgaacaac
tctcacactatgcatacagtcgaacatttcaaagttggaaagtcaaaacaggttatgagt
tctacacaaattatggcttgtttggattggtttccatgtatggaagtcaataacaaaact
atcaatgcaaaattggcatattcatggaataacgtacttaacatcttggaggtggataac
agctcctttccttccaatctcttgtctgtggtatctgacttgaaagacaaagataagggg
attcccaagttacccattaagaaagtcagtcgctggaatactacaaataagcacgattcc
attgtttctgtgaaatggatttcttccgacatcctttgtgtcttcattaaagaaggcagc
cagccccatggttcactcaaggttacagcgctctacctctctaacggtattctcaaacga
aattccataaaggtattcaaacataggctacttgcgcttactgactctgacaatatccga
aagctatatatagggcgactgctcagttgggcagatgttcttcttggattgctatcgagc
ggtaagtatgctgaagcattgtccacggccaatgaattctacaattcagcaaataccggt
aaattggttttggtcggacttccagaagacccttctgctcgattcaagcttgtcagacct
tacttgattcaaattatgaaagagtctgtaccacacctcttttcatatggatacgagaat
ctgcactattttttgacaacctatttcagtatcatttccaatttgacacgcgaggatagc
aaagaagatcttctgtatttgttagagatgatatttgaaaaattagatgagaagtctatt
ttctttgatgttcttgagagctacactctatcaggtagcatttcgtctttaccacctctc
attctaaaacaacttgtagaacactatgtcaagactgaaagaggtgagttgcttactgag
attctttgtattcttgatatcaagacattagacatcgacttaacaatacaattgtgcaat
cagtacaatcttcgcgattgcttgatctacatatggaactacttattggacgactacgag
actcctttggtagattttattaaagatttcagaaatcctgagttcttattgaaggaagat
tacctaagagcatatagctacatgtctttcgtactcaccggcagacaatatcccacagat
agattcatcgatggtctcaaggatattcctataaaggaaagcatttgtaatatacttttc
agcagtacaactgtcacttggcctgcccacaatggcgaggaattacatgccgataatgaa
gataccatatttccttacctcttttctttcttgaaagctaattcgttcgaaatgctttca
actcttaatgagttctttgaggagccgtatttgaatgatatcgaaacaaagaagttaaat
cgtcagtatatcaccgatgctcttctcgatattttcgaagcaaatgaacatttattcact
gatgaagatagatgtcaattagctatattcataggtcgcaactatgctaagtactcacag
ttcattcggttatccgaatctgttcttggaaggataatcaatgacctttgtggcaatacc
aacgttgcaattctgagtgattgtgaattggcattgcagagtcttcttccatactatgag
cctgagaatgatgatttgttatatgagaagttgactgcagccaaatattatagtgtgttg
atcaacatttacaagtctgaaggtagatattctaaagtattggagatgtggttaagcaag
ttgatgaatgaccctagtggtgagtttcagaatgagtctctcagtcaggttttggagaat
tctttcatgttgacaaagaagcctgttgatcgattgagtttgattaatgtcatcatagta
aattttgaacgatttactgctattgatttggacaatttcttagttttgatttcacgattt
tccccgcaattacaccacgaagctctcaacattaaggataatgtcttgatgtttaagtat
ttggacgaattgtttcatcagagcaagtctctgttgtcggatgatccacatttgcccaac
ttgatctcaaagaatatcgaattgcactgcatttatgataagactactattttcaagttt
gttgagacttggaaagaagagttggttagagatcaagatcaatttgccagaaccattcag
atactaaaggacaaccagcaggttgatagtgttgccgagcttgtggtttttcagggacat
tactatgaagcattgaagtacatcttgacattcattaacagcatatctgcatcattagat
gacgaagggctcaagtctacatttaccaagctattgcatcaatcaatgaagatttgtgaa
ctagccgaaacttacgaagagtatgatggagacttaattttgaatgaaaagatgtggttg
gaccttattggaaatgttgtgaatatggctagcatcatgcaacataacgcagaggtacat
acttttctcaatggctgcattcatgactgtttcagagccataagtgatgccaaacttaat
actaataaggaacagtcgtttcttacaatcttcaacaagtttctcgagagttcctcagac
aattctactttggccaatgtcagaggtatattacaagagaactttgtttcgtactcttac
gagagcgaaatgctccgtatttcattgtcgatgcttaaccagggaatatacaaggaactc
aaacagatcaaaatggataacttgagtggttgggctatacaacaaaagctttgtgcatct
tgcggcaaaatcatgtgggggccagatgtatctcaagataattactcggcatgggaagac
agacaatctgctgcactctacatcatgggctcgagcctaggcaccaagttcgacaatgac
aaataccaccattgtcaattgattttcttcaagtgtagccatggtttccattcgagttgt
ctagagagcttgggcgtcagcgttgcctgcgttatctgttcgtcataa
DBGET
integrated database retrieval system
