KEGG   Scheffersomyces stipitis: PICST_82497
Entry
PICST_82497       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K06634  cyclin H
Organism
pic  Scheffersomyces stipitis
Pathway
pic03022  Basal transcription factors
pic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PICST_82497
  09124 Replication and repair
   03420 Nucleotide excision repair
    PICST_82497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_82497
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_82497
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PICST_82497
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PICST_82497
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N DUF7018
Other DBs
NCBI-GeneID: 4838003
NCBI-ProteinID: XP_001383393
JGI: 82497
UniProt: A3LRD0
LinkDB
Position
3:580796..582113
AA seq 404 aa
MSVGTEIKREAEENVEQPEAKKKRISNDDLFRRSTQFEIWSYTQESLDKTKRAANAAGAK
IATQKFNETFETIEKEQPEVFQTHNETLNKDKLLTLLSFEEEAKYLNYYTQNIIPIAKFF
KMPTQVKLTAVSFFRKFYLSNSVMQYHPKNIMYTSVFLAAKSENYFISIDSFIKALKDTE
AKDILDLEFIILQSLQFTLLVHHAFRPLYGFFLDFQAVLLHPSPLMYDVSVNTLGSLYDK
AKTWLNDNVVLSEVAFLFTPPQIALAAMYEVDKRITDRYLKRKFLKEHHELDAIKEEDSG
VKKEDSEVIEKIESTESVENGEDKKDGENETANEHKEKSTVESQREQYETLVRTIRKCIK
IAKQVQTSSREEVKEIDRKCFYALNPKRLIEKQVKKVTKEATTS
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtctgtaggcacagaaataaaaagggaagccgaggagaatgtagaacaaccggaagcc
aaaaagaaacggatttccaatgacgatttgttcagaagatccacccaatttgagatctgg
tcatatactcaagaatctctagacaagaccaagcgggctgccaatgctgctggagccaag
atagcgacacagaagttcaacgaaacatttgaaacaatcgaaaaggaacagcctgaagtt
tttcagacacataacgagactttgaataaagataagttgcttacattgctcagtttcgaa
gaggaagcaaagtacttgaattactacacgcagaatattatccccatagccaaattcttc
aagatgcccacccaggtgaaattgacggcagtgtcgttcttcagaaagttctatctttcc
aattcggtcatgcaataccatcccaagaatatcatgtatacgagtgtattcctagcagca
aagtcagaaaactatttcatctctatagattcattcatcaaagcgttgaaagatactgaa
gctaaagacattttagatcttgaatttatcatcttgcagagcttacagtttacattgctt
gtgcaccacgcctttcgtccattgtacggattctttcttgatttccaagctgtgctattg
cacccatccccattgatgtatgacgtatcggtcaacacgttaggaagcttatacgataaa
gcaaagacatggctaaacgacaatgtggtgcttagcgaggtcgcattcttatttactcca
ccacagatagctcttgctgccatgtatgaagtagataaaagaatcacagatagatacttg
aagagaaagttcttgaaggaacaccacgaacttgatgctatcaaagaagaagattctgga
gttaagaaagaagattcggaagtaattgagaagattgaaagtaccgaaagtgtagaaaac
ggcgaagacaagaaggatggagaaaacgaaacagctaatgagcacaaagaaaagtctaca
gtggagagtcaaagagagcagtatgagactttagtgaggacaatcagaaagtgtatcaag
atagcgaaacaggttcagacatcctctcgtgaagaagtgaaggagattgaccgtaaatgc
ttctatgctttgaaccctaagagattgatagagaaacaggtgaaaaaggtcaccaaagaa
gccaccacttcatag

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