Entry |
|
Name |
(RefSeq) predicted protein
|
KO |
|
Organism |
pic Scheffersomyces stipitis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pic00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_82497
09124 Replication and repair
03420 Nucleotide excision repair
PICST_82497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pic03021]
PICST_82497
03400 DNA repair and recombination proteins [BR:pic03400]
PICST_82497
Transcription machinery [BR:pic03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PICST_82497
DNA repair and recombination proteins [BR:pic03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PICST_82497
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:580796..582113
|
AA seq |
404 aa
MSVGTEIKREAEENVEQPEAKKKRISNDDLFRRSTQFEIWSYTQESLDKTKRAANAAGAK
IATQKFNETFETIEKEQPEVFQTHNETLNKDKLLTLLSFEEEAKYLNYYTQNIIPIAKFF
KMPTQVKLTAVSFFRKFYLSNSVMQYHPKNIMYTSVFLAAKSENYFISIDSFIKALKDTE
AKDILDLEFIILQSLQFTLLVHHAFRPLYGFFLDFQAVLLHPSPLMYDVSVNTLGSLYDK
AKTWLNDNVVLSEVAFLFTPPQIALAAMYEVDKRITDRYLKRKFLKEHHELDAIKEEDSG
VKKEDSEVIEKIESTESVENGEDKKDGENETANEHKEKSTVESQREQYETLVRTIRKCIK
IAKQVQTSSREEVKEIDRKCFYALNPKRLIEKQVKKVTKEATTS |
NT seq |
1215 nt +upstreamnt +downstreamnt
atgtctgtaggcacagaaataaaaagggaagccgaggagaatgtagaacaaccggaagcc
aaaaagaaacggatttccaatgacgatttgttcagaagatccacccaatttgagatctgg
tcatatactcaagaatctctagacaagaccaagcgggctgccaatgctgctggagccaag
atagcgacacagaagttcaacgaaacatttgaaacaatcgaaaaggaacagcctgaagtt
tttcagacacataacgagactttgaataaagataagttgcttacattgctcagtttcgaa
gaggaagcaaagtacttgaattactacacgcagaatattatccccatagccaaattcttc
aagatgcccacccaggtgaaattgacggcagtgtcgttcttcagaaagttctatctttcc
aattcggtcatgcaataccatcccaagaatatcatgtatacgagtgtattcctagcagca
aagtcagaaaactatttcatctctatagattcattcatcaaagcgttgaaagatactgaa
gctaaagacattttagatcttgaatttatcatcttgcagagcttacagtttacattgctt
gtgcaccacgcctttcgtccattgtacggattctttcttgatttccaagctgtgctattg
cacccatccccattgatgtatgacgtatcggtcaacacgttaggaagcttatacgataaa
gcaaagacatggctaaacgacaatgtggtgcttagcgaggtcgcattcttatttactcca
ccacagatagctcttgctgccatgtatgaagtagataaaagaatcacagatagatacttg
aagagaaagttcttgaaggaacaccacgaacttgatgctatcaaagaagaagattctgga
gttaagaaagaagattcggaagtaattgagaagattgaaagtaccgaaagtgtagaaaac
ggcgaagacaagaaggatggagaaaacgaaacagctaatgagcacaaagaaaagtctaca
gtggagagtcaaagagagcagtatgagactttagtgaggacaatcagaaagtgtatcaag
atagcgaaacaggttcagacatcctctcgtgaagaagtgaaggagattgaccgtaaatgc
ttctatgctttgaaccctaagagattgatagagaaacaggtgaaaaaggtcaccaaagaa
gccaccacttcatag |