Scheffersomyces stipitis: PICST_82631
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Entry
PICST_82631 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14308
nuclear pore complex protein Nup54
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_82631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_82631
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_82631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
4837867
NCBI-ProteinID:
XP_001383673
JGI:
82631
UniProt:
A3LQZ4
LinkDB
All DBs
Position
3:complement(227934..229797)
Genome browser
AA seq
551 aa
AA seq
DB search
MFSSGNSAGGGLFGASQNNPGSSSMFGSAQPASGTFGQNTATASGPLQVNTNSGGLFGGA
SKAPATSGGLFGSSSGVGGGGFGQTGNKPATAAGGGLFGGSTNSNTGGLFGKPAGIAAPA
ASTGGGLFGGNTQQNSAAGGGLFGGSTATSGGLFGNKPSGAAGNSGGLFGSGNTASVNTG
SSLFGSKPAASTSGGLFGTSNTASNTGGGLFGSQQQQQQQQQQQQQQPQQSSLFGVNSTN
NAQPAFGWNSSQQQKSSFGTSQPALNNTFGATNPIASAAPASNTNNKYTPAINDQLIKIK
EQWDPNSPKCALKTHFYNKFSEQEINILLNQQRPNNETPEDWDNAMSKRPTASHYPIKIS
SFNDVAQRIETQLEHVSKSRVILNEINEKSNALSSKHDLENTTRILKAKAKHTKLSRRLL
RLATVLAILKLKGYPLLPEEEEISKQFDVLSSKLNDPNSPVGKLSDVFARLAILKERAED
LNYQFEVSIGGLNGLANDDKQEQRVAEQKNSNIEETINKLSKVLLKQQMGLNYLNEVLEK
DLEVVEKVASR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcgggaaattcagcgggaggcggtctttttggtgcgtctcagaacaatcca
ggctcttcttccatgtttggatcagcacaaccagcgtctggaacctttggccagaataca
gctacggctagcggcccattgcaagtgaacacaaactctggtggtttatttggcggtgct
tccaaagctcccgccacctctggagggctttttggttcttctagcggagttggaggtggc
ggatttggccagacgggtaacaaaccagccacagctgctggtggtggtctctttggaggt
tctaccaattctaacactggaggtttgtttgggaagcctgccggaattgctgccccagcg
gcttccacaggtggaggattgtttggcggaaatacccagcaaaatctggctgctggaggt
ggactttttggaggctctacagctacttctggtggcttatttggcaataaacccagtgga
gctgctggaaatagtggaggattgtttggaagtgggaacactgcttctgtcaataccggt
tctagtttatttggaagcaagccggcagcatctacaagtggaggactttttggaacttct
aatacagcctctaatacaggagggggattgtttggatctcagcagcaacagcaacagcaa
caacagcagcaacaacaacaaccacaacagtcttctttatttggagtcaattcaaccaac
aatgcccagccagcttttggctggaacagtagccaacaacagaagtctagttttggcacg
tctcaaccagcattaaacaacacatttggtgcaactaatcctatcgcatcggcagctcca
gcttccaacactaataacaagtatacaccagcaataaacgatcagttgatcaagatcaaa
gagcaatgggaccctaattcgcctaaatgtgcattgaagactcacttctacaacaaattc
agtgagcaggaaatcaacattctcttgaaccagcagagacctaacaacgaaaccccagaa
gactgggataacgctatgagcaaaagacccacggctagccattatcctatcaagatttcg
tcatttaacgatgtagcacagagaatagaaactcagcttgaacatgtgtcaaagtctagg
gtgatattgaatgaaatcaacgagaaactgaatgcattgtcttccaagcacgatttggaa
aatactactagaattttaaaggcgaaagccaaacatacaaagttgtcaagaaggttgttg
agattggccacagtgttggccatcttgaagttgaagggttaccctcttttgccagaagaa
gaagagatttccaagcagttcgatgtgttatcttctaagcttaatgatccaaacagtccc
gtagggaagttgagtgacgtctttgccagattggcaatcttgaaagagagagccgaggac
ttgaactaccagttcgaagtctctattggtgggttgaacggtttggctaatgatgacaaa
caggaacagagagtggctgaacagaaaaacagcaatatcgaagagaccatcaacaagtta
tccaaggttctcttgaagcaacaaatgggattgaactacttgaacgaggtgttggagaag
gatttggaggtggtggaaaaggttgcttctcgctaa
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