Scheffersomyces stipitis: PICST_82821
Help
Entry
PICST_82821 CDS
T01023
Symbol
DBP2
Name
(RefSeq) DEAD box RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_82821 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_82821 (DBP2)
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_82821 (DBP2)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PICST_82821 (DBP2)
Spliceosome [BR:
pic03041
]
Complex A
U1 snRNP components
U1 related factors
PICST_82821 (DBP2)
Complex B
PICST_82821 (DBP2)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
Helicases
PICST_82821 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
4838019
NCBI-ProteinID:
XP_001383660
JGI:
82821
UniProt:
A3LQW7
LinkDB
All DBs
Position
3:complement(147617..150149)
Genome browser
AA seq
530 aa
AA seq
DB search
MNNYNNGDYKGGREQHFGGNNNYNRGYGGNGGFGGNRYNERVELTTPDWDLESLPKFEKN
FYTEHPDVAARSDKDIAAFRNEHQMSCLGSDIPHPITTFDEAGFPEYVLNEVKAQGFPSP
TAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPAIVHINAQPLLSPGDGPVVLVLAPTR
ELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEIVIATPGRLIDMLEMGKT
NLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLQDP
IQVRIGSLELAASHTITQVVEVISEYEKRDRLVKHLETATTEKESKVLIFASTKKTCDEV
TSYLRADGWPALAIHGDKQQSERDWVLREFKTGKSPIMVATDVAARGIDVKGINFVINFD
MPGNIEDYVHRIGRTGRGGATGTAVSFFTDGNNKLGGDLCKIMREAKQTIPPELQRFDRK
SFGAHIRYGGGRGGRGGYGRGRGGYGGRGGYGQRNYQTGSNQAPLSNRRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactacaacaacggtgactacaaaggtggcagagaacaacacttcggtggaaac
aacaactacaaccgcggttatggtggaaacggtggattcggtggaaaccgttacaacgag
agagttgaactcaccaccccagactgggacttggaatcgttgccaaagttcgaaaagaac
ttctacactgaacacccagatgttgctgcccgtagtgacaaagacattgctgccttcaga
aacgaacaccagatgagctgtttgggctcagacattcctcatcccatcactactttcgat
gaggctggattcccagaatacgtgttgaacgaagtcaaggcacagggtttcccttctcca
actgccattcaatgtcagggttggcccatggctctttctggtagagacatggtgggtatt
gctgctactggttcgggtaagaccttatcgtactgtttgcctgctattgtccacatcaac
gctcagcccttgttgagccctggtgatggtcctgttgtgttggttttggctcctaccaga
gaattggctgttcagattcagcaagaatgctccaagttcggatcttcttccagaatcaga
aacacctgtgtctatggtggtgcaccaaagggtcaacagatcagagacttggccagaggt
gttgaaattgtcattgccactccaggtagattgatcgatatgttggaaatgggtaagacc
aacttgaagagagtaacctatttggttttggatgaagccgacagaatgttggatatgggt
ttcgaacctcaaatcagaaagattgtcgaccagatcagaccagaccgtcaaaccttgatg
tggtccgccacttggccaaaggaagttcaaaacttggctagagactacttgcaagaccct
atccaagtcagaattggttccttagaattggctgcctctcatactatcacccaagttgtt
gaagttatttcggaatacgaaaagcgtgacagattggtaaagcacttggaaaccgctacc
accgagaaggagtccaaggtgttgatcttcgcctccaccaagaagacttgtgatgaagtc
acttcgtacttgagagctgacggatggcccgcattggctatccacggtgacaagcaacag
agtgaaagagactgggtcttgagagaattcaagaccggtaaatcccctatcatggtggct
actgatgttgctgccagaggtattgatgtcaagggtatcaatttcgttatcaacttcgac
atgccaggtaacattgaagattacgtccacagaatcggtagaaccggaagaggtggtgcc
actggtactgctgtttctttcttcaccgatggtaacaacaagcttggtggtgatttgtgc
aaaatcatgagagaagctaagcaaaccattcctccagaattacagagattcgacagaaag
agtttcggtgcccacattagatacggtggtggacgtggtggtcgtggtggctacggccgt
ggacgtggtggttacggtggacgtggtggttatggtcaaagaaactaccaaactggatcc
aaccaggctcctttgtccaaccgtcgtttttaa
DBGET
integrated database retrieval system
