Scheffersomyces stipitis: PICST_83006
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Entry
PICST_83006 CDS
T01023
Symbol
ATG13
Name
(RefSeq) Autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
pic
Scheffersomyces stipitis
Pathway
pic04136
Autophagy - other
pic04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PICST_83006 (ATG13)
04136 Autophagy - other
PICST_83006 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_83006 (ATG13)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_83006 (ATG13)
Membrane trafficking [BR:
pic04131
]
Autophagy
Autophagosome formation proteins
ULK complex
PICST_83006 (ATG13)
Atg1 complex
PICST_83006 (ATG13)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
PICST_83006 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
4838362
NCBI-ProteinID:
XP_001383323
JGI:
83006
UniProt:
A3LQY1
LinkDB
All DBs
Position
3:188432..>191913
Genome browser
AA seq
779 aa
AA seq
DB search
MASQDISYQYKSQQEHYPNEKISDSYVQKQNSKLTQVIQQCFSKAVKIIIQSRTVPPAAA
SPLLNPALHDDSASGNKINRWFNLHIQNSQDLPKDDLKLWKSNHLQSMPPMIIETYLDLR
QLTSSQTIVLNDDNGNPWAVAKSGGKKQEVVLERWLIEFDHTDASGSIVDELPLIYKQAI
ILFRSIYGFARLMPAFKLKKRLLINKSSTKLNKLTIGNKILDGKQPISSKGRIGLSKTII
PRQMLTTDSHMSQKHFQPIQTSLGTLKISIAYRNHCDFCIHDNEEVLSTHFISMDSTPLT
ESGHGHTKANNTSMSVSPCSSGHPALREGSPTKRGTPPTAIQPFKVGSISNSPPPASHTP
NSGYGGSLERRISITSNRSTSNASLFAMLRNPRSSTSSTHTTSNIPIAPSSSSNSTNATN
MNNMSYPRSISSSHGSNMQHDDSMFSNPDSTTNTPRFSSSFGSRASRRYSNTSVRQSTPV
AASTLTGGSPLSGLYIDDDISEFVRSIDSKADLRFSNSYTAHNSGEPKNNMGSPSGGDAL
NKFQMMKSHHQQLGDSVNASLILQHNNAVSGSGSGFGVSNSRHSSTSRKSSHSIRSPSPS
MSGLYDVVPGSYGRSERRSSSGAGVPGQLSLPSGGGLAAHSPSATEPTSAATITPRETNF
NFSNASFLRSASKLSATPVTSTTTAHATIHSVTGMATSPSLYQRTKVGSSIHYENVFEDD
DDDEMVMKKPVVTSSGRDEEQLQHKQMKVVSIEKDAGANNFDDDDLLFTMSDMNLTKSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccaagatatcctgtaccagtacaaactgcagcaggagcattatcccaacgaa
aagatctcagattcatatgttcagaagcaaaactccaagctcactcaagttatccagcaa
tgtttcagcaaggccgtcaagataatcatccaatcacgaacggttcctccggcagctgca
tcgccattgctcaatccagcacttcacgatgattctgccagcggaaacaaaatcaatcgt
tggttcaatttgcatatccagaactcccaggatcttcccaaagacgatctcaagctctgg
aagtccaaccacttgcaaagtatgcctcccatgatcatcgagacgtatcttgacttgagg
caattgacctcaagtcaaaccatagttttgaatgatgataacggtaacccgtgggcagta
gccaagagcggaggcaagaagcaggaagtggttttagaaagatggttgattgaattcgac
cacacagatgctctgggctcgatagtagacgaattacctttgatctacaagcaggccatt
attttgttccgcagtatctatggttttgctcgtctaatgcctgctttcaagttgaaaaag
agactcttgatcaacaaatcaagcaccaagttaaacaaattgactataggcaacaaaatt
ttggatggaaaacagcccatcagctctaagggaagaattggcttatccaagacgataatc
ccacgtcaaatgctcactactgactctcatatgagtcaaaagcatttccagcccattcaa
accagcttagggactttaaagatatccatagcctatagaaaccactgcgatttctgtatt
cacgacaacgaagaggtgctttctactcatttcataagcatggattcaactcccttgact
gaatcgggacatggccatactaaggctaacaatacttcaatgtctgtctcaccttgttct
tcgggacatcctgctttgagagagggttctcctacgaagaggggaacacctccaacggcg
attcaaccattcaaggttggctctattagtaattctcctcctccagcatcacatacgcca
aatagcggctatggaggatcgttggaaaggcggatttctattacaagcaacagatcgact
tcaaatgcttctttgtttgcaatgttgagaaaccctagaagtagtacatcgtcaacacat
accacttctaatatcccgatagcaccgagctcgtcgagtaatagcactaatgccacgaac
atgaataacatgtcgtatcctcgctctatttcttcttcgcacggttcaaacatgcaacat
gacgatagcatgttttcaaatccagacagtaccaccaatacgccgcgcttttcgtcttcg
tttggctcgcgtgccagcagaaggtactccaatactagtgtaagacaaagtactcctgta
gctgctagcacattaactggtggaagtcccttgagtggactttatattgatgatgatatc
agtgagtttgttcgtctgattgatagtaaagcagatcttcgtttctctaattcgtatacc
gctcataacagcggtgaacccaagaacaatatgggttctccaagtggaggtgacgcttta
aacaagttccagatgatgaagagtcaccaccaacaattaggtgacagcgtaaatgccagc
ttaattttgcagcataacaatgcagtcagtggttctggcagtggatttggcgtaagcaat
tccagacactccagcacaagtcgtaagagctcccattctatacgttcgccttctccttcg
atgtctgggctttatgatgtagttcctggcagctatgggagatctgagagaaggtcttct
tcgggagctggtgttcctggtcagctttcattaccttctggtggtggtttggctgcacat
tctccgtcggccacagaacctacttctgctgcgacgataacgccgcgcgaaacgaatttt
aacttttccaatgcatcatttcttcgatcggcaagcaagctttctgcaacccctgtcact
tctacaactacagcgcatgctacaatccatctggtgactggtatggctacttcaccttct
ttataccaacgtacgaaggttggatcgtctattcactatgaaaatgtgtttgaagatgac
gacgacgacgagatggttatgaaaaaaccagtcgtcacctcttccggcagagatgaagaa
cagctacaacacaaacaaatgaaagtggtaagtatagaaaaagatgcaggtgcaaataat
ttcgacgacgatgacttgctatttactatgagcgatatgaaccttaccaaaagttcatag
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