KEGG   Scheffersomyces stipitis: PICST_83006
Entry
PICST_83006       CDS       T01023                                 
Symbol
ATG13
Name
(RefSeq) Autophagy-related protein 13
  KO
K08331  autophagy-related protein 13
Organism
pic  Scheffersomyces stipitis
Pathway
pic04136  Autophagy - other
pic04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:pic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    PICST_83006 (ATG13)
   04136 Autophagy - other
    PICST_83006 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_83006 (ATG13)
   03029 Mitochondrial biogenesis [BR:pic03029]
    PICST_83006 (ATG13)
Membrane trafficking [BR:pic04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    PICST_83006 (ATG13)
   Atg1 complex
    PICST_83006 (ATG13)
Mitochondrial biogenesis [BR:pic03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    PICST_83006 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 4838362
NCBI-ProteinID: XP_001383323
JGI: 83006
UniProt: A3LQY1
LinkDB
Position
3:188432..>191913
AA seq 779 aa
MASQDISYQYKSQQEHYPNEKISDSYVQKQNSKLTQVIQQCFSKAVKIIIQSRTVPPAAA
SPLLNPALHDDSASGNKINRWFNLHIQNSQDLPKDDLKLWKSNHLQSMPPMIIETYLDLR
QLTSSQTIVLNDDNGNPWAVAKSGGKKQEVVLERWLIEFDHTDASGSIVDELPLIYKQAI
ILFRSIYGFARLMPAFKLKKRLLINKSSTKLNKLTIGNKILDGKQPISSKGRIGLSKTII
PRQMLTTDSHMSQKHFQPIQTSLGTLKISIAYRNHCDFCIHDNEEVLSTHFISMDSTPLT
ESGHGHTKANNTSMSVSPCSSGHPALREGSPTKRGTPPTAIQPFKVGSISNSPPPASHTP
NSGYGGSLERRISITSNRSTSNASLFAMLRNPRSSTSSTHTTSNIPIAPSSSSNSTNATN
MNNMSYPRSISSSHGSNMQHDDSMFSNPDSTTNTPRFSSSFGSRASRRYSNTSVRQSTPV
AASTLTGGSPLSGLYIDDDISEFVRSIDSKADLRFSNSYTAHNSGEPKNNMGSPSGGDAL
NKFQMMKSHHQQLGDSVNASLILQHNNAVSGSGSGFGVSNSRHSSTSRKSSHSIRSPSPS
MSGLYDVVPGSYGRSERRSSSGAGVPGQLSLPSGGGLAAHSPSATEPTSAATITPRETNF
NFSNASFLRSASKLSATPVTSTTTAHATIHSVTGMATSPSLYQRTKVGSSIHYENVFEDD
DDDEMVMKKPVVTSSGRDEEQLQHKQMKVVSIEKDAGANNFDDDDLLFTMSDMNLTKSS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggcttcccaagatatcctgtaccagtacaaactgcagcaggagcattatcccaacgaa
aagatctcagattcatatgttcagaagcaaaactccaagctcactcaagttatccagcaa
tgtttcagcaaggccgtcaagataatcatccaatcacgaacggttcctccggcagctgca
tcgccattgctcaatccagcacttcacgatgattctgccagcggaaacaaaatcaatcgt
tggttcaatttgcatatccagaactcccaggatcttcccaaagacgatctcaagctctgg
aagtccaaccacttgcaaagtatgcctcccatgatcatcgagacgtatcttgacttgagg
caattgacctcaagtcaaaccatagttttgaatgatgataacggtaacccgtgggcagta
gccaagagcggaggcaagaagcaggaagtggttttagaaagatggttgattgaattcgac
cacacagatgctctgggctcgatagtagacgaattacctttgatctacaagcaggccatt
attttgttccgcagtatctatggttttgctcgtctaatgcctgctttcaagttgaaaaag
agactcttgatcaacaaatcaagcaccaagttaaacaaattgactataggcaacaaaatt
ttggatggaaaacagcccatcagctctaagggaagaattggcttatccaagacgataatc
ccacgtcaaatgctcactactgactctcatatgagtcaaaagcatttccagcccattcaa
accagcttagggactttaaagatatccatagcctatagaaaccactgcgatttctgtatt
cacgacaacgaagaggtgctttctactcatttcataagcatggattcaactcccttgact
gaatcgggacatggccatactaaggctaacaatacttcaatgtctgtctcaccttgttct
tcgggacatcctgctttgagagagggttctcctacgaagaggggaacacctccaacggcg
attcaaccattcaaggttggctctattagtaattctcctcctccagcatcacatacgcca
aatagcggctatggaggatcgttggaaaggcggatttctattacaagcaacagatcgact
tcaaatgcttctttgtttgcaatgttgagaaaccctagaagtagtacatcgtcaacacat
accacttctaatatcccgatagcaccgagctcgtcgagtaatagcactaatgccacgaac
atgaataacatgtcgtatcctcgctctatttcttcttcgcacggttcaaacatgcaacat
gacgatagcatgttttcaaatccagacagtaccaccaatacgccgcgcttttcgtcttcg
tttggctcgcgtgccagcagaaggtactccaatactagtgtaagacaaagtactcctgta
gctgctagcacattaactggtggaagtcccttgagtggactttatattgatgatgatatc
agtgagtttgttcgtctgattgatagtaaagcagatcttcgtttctctaattcgtatacc
gctcataacagcggtgaacccaagaacaatatgggttctccaagtggaggtgacgcttta
aacaagttccagatgatgaagagtcaccaccaacaattaggtgacagcgtaaatgccagc
ttaattttgcagcataacaatgcagtcagtggttctggcagtggatttggcgtaagcaat
tccagacactccagcacaagtcgtaagagctcccattctatacgttcgccttctccttcg
atgtctgggctttatgatgtagttcctggcagctatgggagatctgagagaaggtcttct
tcgggagctggtgttcctggtcagctttcattaccttctggtggtggtttggctgcacat
tctccgtcggccacagaacctacttctgctgcgacgataacgccgcgcgaaacgaatttt
aacttttccaatgcatcatttcttcgatcggcaagcaagctttctgcaacccctgtcact
tctacaactacagcgcatgctacaatccatctggtgactggtatggctacttcaccttct
ttataccaacgtacgaaggttggatcgtctattcactatgaaaatgtgtttgaagatgac
gacgacgacgagatggttatgaaaaaaccagtcgtcacctcttccggcagagatgaagaa
cagctacaacacaaacaaatgaaagtggtaagtatagaaaaagatgcaggtgcaaataat
ttcgacgacgatgacttgctatttactatgagcgatatgaaccttaccaaaagttcatag

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