Scheffersomyces stipitis: PICST_83348
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Entry
PICST_83348 CDS
T01023
Symbol
SWI3
Name
(RefSeq) general RNA polymerase II transcription factor
KO
K11772
SWI/SNF complex subunit SWI3
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_83348 (SWI3)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_83348 (SWI3)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
PICST_83348 (SWI3)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
PICST_83348 (SWI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
4838866
NCBI-ProteinID:
XP_001384570
JGI:
83348
UniProt:
A3LU89
LinkDB
All DBs
Position
4:complement(1422716..1426475)
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AA seq
777 aa
AA seq
DB search
MSAEYNDAIEPTVEDSSEPQVEEQIENEEINEDEEAEDVVNDNEDEDAKKEEEQEVNADE
GDNDIPEQSEDIENSEDIEASISEEAGSEEQQPDQDIPTEPEAETAPETTDPEQNEEGSA
EEVEEQENADVENEAAGDVEETVKTEELSDAPKESADVIMEEAESKDEEQSHDAVAVAVG
DNESEDKKADIKPQYADDDEEEEDDDDEDEKDTRVYTKQTHLIVVPSYACWFNMKKIHQI
EKESLPEFFGSSHPSKSPKIYVNYRNFMINSYRLNPNEFLTLTSCRRNLVGDVGTLMRVH
RFLSKWGLINYQVKPQFKPGYAVEKLPNGQSVGLPYTGDYHVKYDTPRGLFPFDTFKMNP
EKVNVDKLKKLLKIEDNASVTTGSVTDGNAVSNSSYRSEESKKRSSPSADEQPSKKQNDG
WSAEETEKLITAVKTYRNDWFKVAEAVGTTKTPQQCILKFLKYPIEDRFNPISEKELGLA
RFGSNYPISGVDNPVLSNLAFLSSFVDSDVAKAASQRASKVMDEKIEEKIKEIAESKKAA
EAKNAAEEKSEDSKDKEEAAVKPESETSAKISSEQNGKADHLELVKDVSEGEANTLKDAA
AASFGIVGARSHLFATFEEREMNSISSNIVNHQLAKIDLKLQKVDELERVYECQKRRLAK
QQEEIFIDRLALAKSTINITKKLDDVISLLENQVKAENSSPEKLSSINNLLAEAKNQLYK
PARHSLIEATGESTTNGDDPEHAKDAESSNATAANVNEDDLKPLSLKTPQTFKVWVP
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggagtacaacgacgcgatcgagccgactgttgaagactccctggagccacaa
gtcgaagagcaaattgaaaatgaagaaataaacgaagatgaagaagcagaagatgtcgtt
aacgacaatgaagatgaagatgccaaaaaagaagaagaacaagaagttaatgcagatgaa
ggtgacaacgatatacctgagcaatcggaagatatagagaactcggaagatatagaagcg
tcaatatccgaagaagcaggctctgaagaacaacaaccagaccaagacatacccaccgaa
ccagaagcggagactgcgcccgaaactacagatccagaacaaaatgaagaaggctctgca
gaggaagtcgaagagcaagaaaatgcagatgtagaaaatgaagctgctggggatgtggaa
gaaactgtgaaaactgaagagctttctgatgctcctaaagaatccgcagatgtgatcatg
gaggaagcagagtcaaaggatgaggaacaaagccacgatgctgttgctgttgctgttggt
gacaatgagtcggaagataagaaagctgatataaaacctcagtacgcagatgatgatgaa
gaagaagaagatgatgacgacgaagatgaaaaagatacgagggtttacacaaagcagacg
catctcatagtagtgccgtcatatgcctgttggttcaacatgaagaaaatccatcagatt
gaaaaggagtctttaccagaattcttcggatcttctcacccatcgaaatcgcctaagatc
tacgtcaactaccgtaatttcatgatcaattcatatagattgaaccctaacgaattctta
acgttgacgtcttgtcgtcgtaacttagttggtgatgttggaactttgatgagagtacat
agattcttgagcaagtggggtttgatcaactaccaagtcaagccacagttcaagccgggt
tatgcagttgaaaagttaccaaacggtcaactggtgggcttgccatataccggcgactac
catgtcaagtatgatactcctcgtgggttattcccattcgatacgttcaagatgaatccc
gaaaaggtgaatgtcgataaactcaagaaactcttaaagatcgaggataacgcgtctgtc
actactggttctgtaacagacggtaatgctgtttctaattcttcttataggtctgaggaa
agtaagaagcgttcttcgccttctgcggatgaacaaccttccaagaagcaaaacgacgga
tggtcggcagaagaaaccgaaaaattgatcacagcagttaaaacttatagaaatgattgg
tttaaggtggcagaggctgtgggaaccactaaaacaccccagcaatgtatattaaagttc
ttgaagtatcctattgaggatagattcaatccgatatccgagaaggaattgggattagct
agatttggttcaaactatccaatcagtggtgtggataatccagttttgagcaacttggct
tttttgagcagttttgtggatagcgatgttgcgaaggctgccagtcagcgtgcctcaaaa
gtcatggacgaaaagatagaagaaaagatcaaagaaattgccgaatcaaagaaggcagct
gaagcaaagaatgcagctgaagagaaatctgaagatagtaaagacaaagaggaagcagcc
gttaagccggaatctgagacttccgcaaagatttcctctgaacagaatggaaaggcagac
catttggaactagtaaaggatgtaagtgaaggtgaggctaacacattaaaagatgccgct
gctgcttcatttggaattgtaggagcgagaagtcatttatttgctaccttcgaagaaaga
gaaatgaacagcatcagctcaaacattgtcaaccatcaattagctaagatcgacttgaaa
ttacagaaggttgacgagttggaaagagtatacgaatgtcaaaagaggcgtcttgctaag
cagcaggaagagatctttatcgataggttggcattggctaagtctactatcaatatcacc
aagaagttggacgacgtaatttccttacttgaaaatcaagtcaaggctgaaaacagtctg
ccagagaaattatctagcatcaacaacttgttagctgaagctaagaaccagctttacaaa
cctgctagacactctttgattgaagctactggagaaagcactaccaacggcgatgatcct
gaacatgctaaagacgccgaaagctctaatgctactgccgcaaatgtcaacgaggatgat
ctcaagccattgtcgttaaagactccacaaaccttcaaggtgtgggtgccataa
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