Scheffersomyces stipitis: PICST_83392
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Entry
PICST_83392 CDS
T01023
Name
(RefSeq) supressor of snf1 mutation
KO
K14289
exportin-5
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_83392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_83392
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_83392
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PICST_83392
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
PICST_83392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
4838674
NCBI-ProteinID:
XP_001384454
JGI:
83392
UniProt:
A3LTK3
LinkDB
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Position
4:complement(808958..813402)
Genome browser
AA seq
1245 aa
AA seq
DB search
MTMDSGGVSQIVAALGVVYEPKSSNAQRREAQDFLESIKSNDESPYWGYQLALPENNGKN
YIVRHFGLSLLQNSIKSKYHLFDTTKTLAIRNWVVDLSNKIQQDDPHYLKEKIAFLWVSI
AKRIWGCYLIKGYNKDNIENSHPPENHNHNDNHNNLKPQVSEQEASDGWASMDADLWKLW
SSGFTCRELSLIIIRTLFEDIYLLDDPIASKRTIILNQLSVLIVTPSSILDAIYEHNPNV
SICKALPNGWFVVWSQFLIEILSSNDFKSSTCQAFVPKILATFKTCLHWVQPAVLRSENI
MQTLINILTIPDVKLKTLAVDCLHILFTRSYSSSDDFDFFIGSIFTTEGVSKLMQFYQSL
EIDPDDVDEQVYSLLKKTVEMIVSLSEYLNISSKNKVSWETADVDNYLRLVLATTNHPSL
IISGLSLQMWVTILRFDELSSKDPIVNSLLDLLEIAANRTINYTYDDSNVSKKFLEVDFD
STPDANSFLQNYKKFNEDIVRITICKKPEEGLQWLENRLQAFFSSELGSQCITQYKLDEK
SEALNYGTSQFNIIENCIRGISRWRIWYNGDDFEVVNDRLNKLVESLGERLLAMNIACPL
LIRKQVQTLVQFAPLLKDVSPLMFQVLERILTTATFEYPPNISDDEKELIRDLRTSCGTE
LNRLAYIMPESLKKIFNDLENVVANILSSKKVTDHENVAFKSFLLVIASRSSITDKDELF
AKIVDPELAAWSAPETEKGLMDLHWFMERMGIVEIASYFQSRGITATTNLLEAKMDEEGR
LLKNKLKDHWSSIFPIRATRIFIQYSIEKLGHDSTEYLNLLKLWKPRVQPIIPHILQLLT
QIQAYHNPDNWKELPDAVQAFVRYSCMERFWQQGVSIQSKETFIEENVKAALTLRDFADS
VGHLIRYTREYAFLTIGSLSQLEDTLYEIPNIATMIWKAVAGDTVGITLHSWKHMINSCL
RSVIKFCPVKYVDVFMAELLPKAFIDIDKLIVSRWEKVYQNGLKLQGNEDDETLSEEMME
EHMLRQLTATVVRFLMDVVSQYNSKTTTDTQFACRRLIIENKEVMAPFLQICCHIIMFKD
TKCSFNTILVVRNVLSDILLRDDEVDKFLCDHLMKALLHVLMDDYFVETHGEAAIALTSL
YCTLRSKNDYPARVMIQYLPNITTHHVSNFESLLVSSKSLKHQRAALLELVRIAKEVADD
FDDMDKRKKQLEAASISRKKKTNGVDVMNDPFTESGALNNLFGEE
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggacagcggaggtgtatcccaaatagtagctgcactcggcgtagtatatgag
cccaagtctagcaacgctcagcgccgtgaggcccaggacttcttagagtccatcaaatcc
aacgatgagctgccatactggggttaccagttggcgctaccagagaacaacggtaagaat
tacatcgtgcgtcactttggattgtcgcttctccagaactccatcaaaagcaagtatcat
ctctttgacaccaccaagacattggctatccgcaactgggtggtagatttgagcaataaa
atccaacaagacgatccgcattatctcaaggagaagattgcttttctctgggtatccata
gccaaacgtatctggggatgttatttgatcaagggctacaataaggataacattgaaaac
tcgcatcctcccgaaaaccacaatcataacgataaccataataatctcaaaccgcaagtc
tcagaacaagaagcttccgatggctgggccagcatggatgctgatctctggaagttgtgg
agcctgggattcacgtgtcgtgaactatctctcatcatcattcgcacgctttttgaagac
atttatcttcttgacgatcccattgcttctaaaagaactattattctcaaccaattgagt
gtattgattgtcacaccgtcgtctattcttgatgccatctacgaacacaaccccaatgta
tcgatatgtaaagccttgcccaacggttggtttgtagtttggagccagtttctcattgag
attctctccagcaatgacttcaagagtagcacctgtcaagcttttgttcccaaaattctt
gctacgttcaagacgtgtttgcattgggtccagccagcggttttgcggtcagaaaacatt
atgcaaacactcataaacatcttaacaatccctgacgtcaagttgaaaaccttggctgta
gactgcttgcacatattgttcacgagaagctacagcagcagcgacgactttgatttcttc
atcggttccatcttcaccaccgaaggagtgtcgaagttgatgcagttctaccagtcctta
gaaatagacccagatgatgtagacgagcaggtgtattcgctcttgaaaaagacagtagaa
atgatagtttccctcagcgagtacctcaacatatcatccaagaacaaggtctcttgggaa
acggctgatgtcgacaactacttgagactcgttttagcgacgacaaaccaccctagttta
atcatcagtggtttgtcattacagatgtgggttacaatcttgcgatttgacgaattgagc
tccaaagatcccatagtcaatagcctcttggatttattggaaatcgcagcaaatagaacg
ataaactatacctacgatgacagcaacgtctccaagaagttcttggaggtagattttgat
tcaactccggacgccaactcgttccttcagaactataagaagtttaacgaggatatcgtc
agaattaccatctgtaaaaaacccgaagaaggattgcaatggttggaaaacagactccag
gcgttcttcagctcagaattgggtagccaatgcataacccagtacaagctcgacgagaag
tcagaagcattgaactacggcacgtctcagttcaacatcatcgaaaattgcataaggggc
atttccagatggagaatctggtacaatggcgacgactttgaagttgtcaatgaccgtttg
aacaaacttgtagaaagtttaggtgaaaggcttttggccatgaacattgcctgtcctcta
ttaattagaaaacaggtccaaaccttggttcaatttgctccacttctaaaggatgtgagc
cctttgatgtttcaagtattggagagaattctcacaacagcaacgtttgagtatccacca
aatatatctgacgacgaaaaggagttgatcagagacttgagaacaagttgtggcacagaa
ttgaacagattggcatatataatgcctgaatccttgaagaaaatctttaacgacttggag
aatgtggttgcgaacattttgtcttccaagaaggtcaccgaccacgaaaatgttgctttc
aagtcgtttttgttggttatagcttcaagatcttctattacagataaagacgaactcttt
gccaagattgtggacccagaattggcagcctggtcagcgccagaaacggaaaaaggtctt
atggacttacattggtttatggaaagaatgggtatagtagaaatagcatcatatttccaa
agcagaggcatcactgctacgacaaaccttttagaggcgaagatggatgaagaaggaagg
ctattgaagaataaattgaaagaccattggtcttctattttccccatcagagcaacaaga
atcttcatccagtacagtattgaaaagttgggccacgattccaccgagtacttgaactta
ttaaagttgtggaaaccgcgcgttcagcctatcattccgcacattctacaactcttgact
cagatccaagcttaccataatccagataactggaaagaattacccgatgcggtacaagct
ttcgtcagatacagttgcatggaaagattctggcaacagggtgtttcgattcagtccaag
gagacttttatagaagagaatgtgaaagcagcgttgacgttaagagactttgccgactct
gtgggccatttaattagatataccagagagtatgcgttcttgacaattgggtctttatcg
cagttggaagataccctttacgaaattcctaatatcgcaaccatgatatggaaagcagtg
gctggcgatacagtgggtatcactttacatagttggaagcatatgatcaacagttgtttg
aggagtgtgatcaagttttgtccagtcaagtatgttgatgttttcatggctgaattgctt
cccaaggcatttatcgatattgataagttaattgtcagtagatgggaaaaggtttaccag
aacgggttaaagttgcaagggaatgaagacgacgaaacgttatccgaagagatgatggaa
gaacatatgttgaggcaattgacagctaccgtggttcgtttcttgatggatgttgtgagt
cagtacaattccaaaaccactaccgacacacaatttgcttgtcgtagactcattattgag
aataaggaagtgatggctccgttcctacagatctgttgtcatataatcatgttcaaagac
accaagtgttcattcaacaccatcttggttgtcagaaatgtgttactggatattctcttg
cgagacgatgaagtagacaaatttttgtgtgaccacttgatgaaggcactcttgcatgta
ttgatggatgactactttgtagaaacccatggagaagccgctatagctttgacttcattg
tattgtactttgagatccaaaaacgactatccagctagggtcatgatccaatacttgccc
aacatcaccacacatcacgtgagcaactttgagtcgttgttggtcagctccaagtcgttg
aagcaccagagagctgctttgcttgagttggtcagaatagccaaggaagttgctgacgac
tttgacgacatggacaaacgtaagaaacaacttgaagcagcctctatttccaggaagaaa
aagacaaacggtgtagacgttatgaacgatccatttacagaaagtggcgccttaaacaac
ttatttggggaagaatga
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integrated database retrieval system