Scheffersomyces stipitis: PICST_83552
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Entry
PICST_83552 CDS
T01023
Name
(RefSeq) component of the spliceosome
KO
K06063
SNW domain-containing protein 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_83552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_83552
Spliceosome [BR:
pic03041
]
Complex B
Other components
Prp19-related factors
PICST_83552
Complex C
PICST_83552
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
TnpV
Motif
Other DBs
NCBI-GeneID:
4838573
NCBI-ProteinID:
XP_001384058
JGI:
83552
UniProt:
A3LT86
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All DBs
Position
4:504221..505429
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AA seq
352 aa
AA seq
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MFSSLLPRPKHSSYKAPNSGTNQLRIGPDSQILAISSNSSQTQVVTNPAKGATIAQLHLD
ADGNVDYASTIASAASDGVSKVQATYEDTIPLKTRIPNLKHHFPRYDLDTCPDDSLKECV
EETRAVINRILNDKIGISSEKKNTDGVTFVKYQSNSIVDSNHNVDIVRENEGNESSENGN
RERVIQIREYKEDPMLPPKFKLRKNRHKNPSPPPPILKDTSGTEAKLTKEDREKWRIPAA
VSNWKNNQGFTISLDKRMKAASGGSLDEGAADVNIEKFGSLSSALEQADKQAREDIKIRN
EMLKQRAITEQKEKEAKLKELAALSKNERYSTKRGYHPDQKPTKKRDIGYSH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctcgttgcttccacgcccgaagcattcctcatacaaagcacctaattctgga
accaatcagttgcgcatcggccctgattcgcaaattttggccatctcatcgaatagttca
cagactcaggttgttaccaatcctgccaagggtgctaccatagcgcaattgcatctcgac
gctgatggaaatgtagattatgcactgacgattgcgtctgctgcttctgatggtgtcagt
aaggtccaagccacctacgaagatacaattccactcaagacgagaataccgaacttgaag
caccattttccacgatacgacttagacacttgtccagacgactcgctcaaagaatgcgtg
gaagaaacacgtgctgttatcaacagaatacttaatgataagattggaatcagcagcgaa
aagaagaatactgacggagtgacatttgtgaaataccagagcaacagcattgtagatagc
aaccataatgtcgatatagtacgagaaaatgaaggaaatgaaagtagtgaaaatggaaac
agggagagagttattcagatcagagagtacaaagaggatcctatgttacctccaaaattc
aagttgcgcaagaaccgtcacaagaatccttcacccccaccccctatacttaaagataca
agtggaactgaggctaagctaacgaaggaagatagagagaaatggagaatcccagctgct
gtgtcgaactggaagaacaaccagggtttcacaatctcgttggataagcgaatgaaggca
gcgagcggtggttctcttgacgagggtgctgctgatgtcaatatcgagaagttcggctct
ttatcttcagcattggaacaggcggacaaacaggccagagaagatatcaagattagaaac
gagatgctcaagcagagagctattactgagcaaaaggagaaagaggcgaaattgaaggag
ttagctgcattgtcgaagaatgagaggtatagtactaaaagagggtatcacccggaccaa
aaaccgacaaaaaagagagatattggatattcacattga
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