KEGG   Scheffersomyces stipitis: PICST_83864
Entry
PICST_83864       CDS       T01023                                 
Symbol
NDC1
Name
(RefSeq) nuclear envelope protein
  KO
K14315  nucleoporin NDC1
Organism
pic  Scheffersomyces stipitis
Pathway
pic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PICST_83864 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pic03019]
    PICST_83864 (NDC1)
Messenger RNA biogenesis [BR:pic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PICST_83864 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 4839369
NCBI-ProteinID: XP_001384682
JGI: 83864
UniProt: A3LUU5
LinkDB
Position
5:150634..152580
AA seq 642 aa
MATSPTKASTYQSYYGKVSAKRLRYVHNINILISLLISVSLAIPYGHFWWNLLLSLLFRG
PVIFLSLLLIKSSRMKFSTVEYSSYKTLGSQIYNSLFSVQFLKVSIFYVLSSYFIHFVYI
FQLSFKYDYYLLSKEYRVNPLINDEWIFYWFYPLFLALFYSAHHSVFQRNRLDFRYGTSK
LKPEDSLLARWPSLFGNAVALNVFVAILAPVAYLVVKPIIYKSNILLILILGLDTSIPPF
NVSFSTLLSLSFLSFHILLAWEFVNYAFNVYATIGCLDGKKLISTYSADPINTLLSGLRN
VDPDHQLSRLTAFQELAYIATTNDPEGVKLRTAIYNARSRRGFIWPAILDECSLIIKETT
ARVNYRTTSDMKVLKQNQLSIKEELGSFYSSRNVEESDLFGNSVLGTPTSTPSVPSKLKS
YSELEPKKPVTASIWDSKYAKLANTQIVTPIKSFLISVLDNTNPIIAKLRSLSESISKQY
TIYNERFLSTNVGIFFRTTLKRDTESRVINAVNFGNAVIAISNLLMHSIEEDKNGTIGNS
HICDVLNLLEKPIRATSNYTDFLPASVYLSAVQKRDKRLTKSHLIAVLHDLAMSEFYQIC
IKFNYKLNDLVLNARAYKLAKWVIDVAIADQQSHTNRVPLSL
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggctacctccccgaccaaggccagcacgtaccagtcgtactatggcaaggttctggcc
aaacggttgcgttatgtccacaatatcaacattctcatttcgcttctcatctcagtttca
ttagccattccttacggacatttttggtggaacttgttgctcagtttgttgtttcgtgga
cctgtaattttcctatcacttttgttgatcaaactgtccagaatgaagttctccacagtc
gaatactccagttacaagacgttgggttctcaaatctataacagcctcttttcagtgcag
tttttaaaagtttcgattttctacgtcttatcgtcgtacttcattcatttcgtctacatc
ttccagctttcattcaagtacgactattacttgttgtcgaaagagtatcgcgtcaatcca
ctcatcaacgacgaatggatcttctattggttctacccattgttcttagccttgttctac
agtgcgcaccattcagttttccaaagaaacaggttggacttccgctatgggacatccaaa
ctcaagccagaggattcactcttagcccgttggccctctttgttcggtaatgccgtggcc
ttgaatgtctttgtggccatcctagctcctgtggcctacttagtggtcaaaccaatcatc
tacaagtccaacattctccttattcttatcctcggcttggatacttccattcctccattc
aatgtatcgttctctaccctcttgagcttgtcgtttctctcctttcacattcttttagct
tgggagttcgttaactatgccttcaacgtctatgctactattgggtgcttggatggaaaa
aaacttatcagtacttatagtgctgatccaatcaacaccttgctttcgggcttgcgtaat
gtagatccagatcaccagttgagcagattaaccgcattccaggaattggcatatatagct
acaaccaacgacccggagggtgtcaagttgagaacagctatctacaatgctcgttcgaga
agaggctttatatggccagccattttggacgagtgttcgttgataattaaggaaaccaca
gcaagagtcaactaccgtactacttcggatatgaaggttctcaaacagaaccagttgtcc
atcaaagaagaattgggaagtttttacagttccagaaatgttgaagaaagcgacctcttt
ggtaactccgttctcggaactcctaccagcactcctctggttccaagcaaactaaaaagc
tattcggaacttgagccaaagaagccagtaactgcttctatttgggatagcaagtatgca
aaattggccaatacccaaatcgttacacccataaagtcctttttaatatctgttttagac
aacaccaatccaatcattgcaaagttgaggctgttgtctgaatccatttcgaaacagtac
acaatctacaacgaaagattcctttctactaatgtcgggatcttctttagaaccacgttg
aagagggacaccgagtcccgtgttatcaatgccgtcaactttggaaatgcagtaatagcc
atttccaacttattgatgcattccatcgaagaagacaaaaatggcacaatcggaaatagc
cacatctgtgacgtgttgaacttgttggaaaaaccaatcagagctaccagcaactatacc
gatttcttgccggcatcggtgtacttgtcagcagtacaaaagagggacaagagattgacc
aagagtcacttgatagctgtcttacacgacttggctatgagtgaattttaccagatttgc
ataaagttcaactacaagttgaacgacttggttttaaacgccagggcctacaagttggcc
aagtgggtcatcgacgtcgctatagctgaccaacaactgcataccaacagagttccattg
tctctttga

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