Scheffersomyces stipitis: PICST_83864
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Entry
PICST_83864 CDS
T01023
Symbol
NDC1
Name
(RefSeq) nuclear envelope protein
KO
K14315
nucleoporin NDC1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_83864 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_83864 (NDC1)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_83864 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
4839369
NCBI-ProteinID:
XP_001384682
JGI:
83864
UniProt:
A3LUU5
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All DBs
Position
5:150634..152580
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AA seq
642 aa
AA seq
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MATSPTKASTYQSYYGKVSAKRLRYVHNINILISLLISVSLAIPYGHFWWNLLLSLLFRG
PVIFLSLLLIKSSRMKFSTVEYSSYKTLGSQIYNSLFSVQFLKVSIFYVLSSYFIHFVYI
FQLSFKYDYYLLSKEYRVNPLINDEWIFYWFYPLFLALFYSAHHSVFQRNRLDFRYGTSK
LKPEDSLLARWPSLFGNAVALNVFVAILAPVAYLVVKPIIYKSNILLILILGLDTSIPPF
NVSFSTLLSLSFLSFHILLAWEFVNYAFNVYATIGCLDGKKLISTYSADPINTLLSGLRN
VDPDHQLSRLTAFQELAYIATTNDPEGVKLRTAIYNARSRRGFIWPAILDECSLIIKETT
ARVNYRTTSDMKVLKQNQLSIKEELGSFYSSRNVEESDLFGNSVLGTPTSTPSVPSKLKS
YSELEPKKPVTASIWDSKYAKLANTQIVTPIKSFLISVLDNTNPIIAKLRSLSESISKQY
TIYNERFLSTNVGIFFRTTLKRDTESRVINAVNFGNAVIAISNLLMHSIEEDKNGTIGNS
HICDVLNLLEKPIRATSNYTDFLPASVYLSAVQKRDKRLTKSHLIAVLHDLAMSEFYQIC
IKFNYKLNDLVLNARAYKLAKWVIDVAIADQQSHTNRVPLSL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctacctccccgaccaaggccagcacgtaccagtcgtactatggcaaggttctggcc
aaacggttgcgttatgtccacaatatcaacattctcatttcgcttctcatctcagtttca
ttagccattccttacggacatttttggtggaacttgttgctcagtttgttgtttcgtgga
cctgtaattttcctatcacttttgttgatcaaactgtccagaatgaagttctccacagtc
gaatactccagttacaagacgttgggttctcaaatctataacagcctcttttcagtgcag
tttttaaaagtttcgattttctacgtcttatcgtcgtacttcattcatttcgtctacatc
ttccagctttcattcaagtacgactattacttgttgtcgaaagagtatcgcgtcaatcca
ctcatcaacgacgaatggatcttctattggttctacccattgttcttagccttgttctac
agtgcgcaccattcagttttccaaagaaacaggttggacttccgctatgggacatccaaa
ctcaagccagaggattcactcttagcccgttggccctctttgttcggtaatgccgtggcc
ttgaatgtctttgtggccatcctagctcctgtggcctacttagtggtcaaaccaatcatc
tacaagtccaacattctccttattcttatcctcggcttggatacttccattcctccattc
aatgtatcgttctctaccctcttgagcttgtcgtttctctcctttcacattcttttagct
tgggagttcgttaactatgccttcaacgtctatgctactattgggtgcttggatggaaaa
aaacttatcagtacttatagtgctgatccaatcaacaccttgctttcgggcttgcgtaat
gtagatccagatcaccagttgagcagattaaccgcattccaggaattggcatatatagct
acaaccaacgacccggagggtgtcaagttgagaacagctatctacaatgctcgttcgaga
agaggctttatatggccagccattttggacgagtgttcgttgataattaaggaaaccaca
gcaagagtcaactaccgtactacttcggatatgaaggttctcaaacagaaccagttgtcc
atcaaagaagaattgggaagtttttacagttccagaaatgttgaagaaagcgacctcttt
ggtaactccgttctcggaactcctaccagcactcctctggttccaagcaaactaaaaagc
tattcggaacttgagccaaagaagccagtaactgcttctatttgggatagcaagtatgca
aaattggccaatacccaaatcgttacacccataaagtcctttttaatatctgttttagac
aacaccaatccaatcattgcaaagttgaggctgttgtctgaatccatttcgaaacagtac
acaatctacaacgaaagattcctttctactaatgtcgggatcttctttagaaccacgttg
aagagggacaccgagtcccgtgttatcaatgccgtcaactttggaaatgcagtaatagcc
atttccaacttattgatgcattccatcgaagaagacaaaaatggcacaatcggaaatagc
cacatctgtgacgtgttgaacttgttggaaaaaccaatcagagctaccagcaactatacc
gatttcttgccggcatcggtgtacttgtcagcagtacaaaagagggacaagagattgacc
aagagtcacttgatagctgtcttacacgacttggctatgagtgaattttaccagatttgc
ataaagttcaactacaagttgaacgacttggttttaaacgccagggcctacaagttggcc
aagtgggtcatcgacgtcgctatagctgaccaacaactgcataccaacagagttccattg
tctctttga
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