Scheffersomyces stipitis: PICST_84351
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Entry
PICST_84351 CDS
T01023
Name
(RefSeq) vacuolar sorting protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pic
Scheffersomyces stipitis
Pathway
pic04138
Autophagy - yeast
pic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PICST_84351
04148 Efferocytosis
PICST_84351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_84351
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PICST_84351
Hops complex
PICST_84351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DGKI
Motif
Other DBs
NCBI-GeneID:
4840194
NCBI-ProteinID:
XP_001385461
JGI:
84351
UniProt:
A3LXC2
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Position
6:<597391..600249
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AA seq
938 aa
AA seq
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MPSSPSLGWQKLQNVYYSIRPCYDGLSWSIDNLYSNFKVAISTRATILALSSKFVAHPNI
IDVYSISGNKLWSIAYNSRPEDHIVDYVFRNEDLCLVLSNGRFRYYNNFKGNFIEYSYIK
DLVILDNVGSTFNSEASDVGVHGSDVARSYLITNLENNESEEIIKVLEVKTWKQYLIVRL
TSKIILTNLDTLTNYEIPLNTVDPLKIHGFSVVDGPDSSLVLLTSYESTILTFKVDLGLT
SYELNDEGLTEGPFTSIRASSNGQLISLYNVKSSKIYVISNTFDQVLLEYGTSNESSSPY
QIEWCGNDAIILSFKDEIKLIGPDQQSISFFYDIVDEEEFDLDQLLRPGLDDLSFTIPIL
KSEPDGLKIFTTNKVEFLSRVPQCSINLYQIGSAHPSSILLDCIDKLNHHSSKADTSISL
LKSDGTLYAAMSECLEVAQDEFVPVWQKKILRAVSFGKAYFDGYYNADEFLSVLNNIKVL
NQLRSPELGIFLTYQEVVQAGWKEIITMLLKRDQYLLALRIIELLKLDNYKEFVYSDWCC
SKIRKELNMSDIDLFKIVAKKLISLTDDNRNYISVQAISEVAHEEGRINLCKLLVNLEPS
IEKKIQQFLQFEEVELALLKAFQTGDYDIAKIILLHLRDTLSISQFFRVLNQNEQTESIT
DLSTEELNKLDITIPSEKLSISGDLIGNFWVNSAGKFDSKMLSTYYKQEDKNNELNTFKL
KVYLSGNKDSQADEYYENYKAKLQKSLSTSNTKRVNRLFQRELEVLELQKKLGEIYLTQF
YGERSLNSILVRLIKLNQLKMASKVVKDFKITQEKYWYLVLNTYSQLKEFDRLYEFAVGM
DQADSSSLRSPIGFEPFVDASFANGAPKDHISTYIRNSNLKYTDKVKNYLKNGDLKSAAQ
EGFKNKDIDVLRSLLEATSDTDEETNKVIKSYITKLGY
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttctccctcgctcgggtggcagaagctccagaacgtgtactatagcatccgg
ccctgctacgatggcttgagctggtcaattgataacctctattccaacttcaaggtagcg
atttccaccagagccactatactagcattatcttccaaattcgtggcccatcccaacatt
attgacgtctactctatcagcggaaacaagctctggtcaattgcttacaacagccggccc
gaggatcacattgtagactatgtgtttcgtaacgaagacttgtgtcttgtcttgagcaat
ggcagattcagatattacaacaacttcaagggcaacttcattgagtactcgtatattaaa
gatttggttattctcgacaatgtgggctccaccttcaatctggaagcctctgatgtcggt
gtccatggctccgatgtggcccggctgtatctcatcaccaacttggagaataacgaaagt
gaagaaatcatcaaggttctagaagtcaaaacctggaaacaatatttgattgtcagattg
actagtaagattattctcacgaatttggacaccttgaccaattatgagatcccattaaat
actgtagacccccttaagatccatgggttttcagttgtggatggccccgatagctcttta
gtattgctcaccagttatgaatcgaccattctcacatttaaggtagacctaggtttgacc
agttacgagctcaatgacgagggtctcactgagggccccttcacaagcatacgagcctca
tccaacggccaattgatctcgttgtacaatgtaaaaagttccaagatatatgtgataagc
aacacattcgaccaggtactcttggagtacggtaccagcaacgaatcaagctcaccgtac
cagatagaatggtgtggaaacgatgccatcatattgtccttcaaagatgaaatcaagttg
attggtccagaccaacaatcaatttctttcttctacgatattgttgatgaagaagagttt
gatttggaccagcttcttcgtcctggcctagatgacctctccttcacaattcctattctc
aaatctgagcctgatggcctcaaaattttcaccaccaataaagttgaattccttagtaga
gttccacaatgtagtataaatctctatcaaatagggtcagctcatcccagcagcatactt
cttgattgtatagataaactcaatcatcattcttcgaaagcagatacaagcatatcactc
ttgaagtcagatggtaccctctacgctgccatgagtgagtgtttggaagtagcccaggat
gagttcgtaccagtttggcaaaagaaaatccttcgagctgtctcttttggcaaggcttac
tttgatggatattataatgccgatgagtttctctcggttttgaataacatcaaggtcttg
aaccaattgcgatctccggagttggggatctttttgacttaccaagaagtcgttcaggct
gggtggaaagagattataaccatgttgttgaagcgagaccagtatcttcttgcgttgagg
ataattgaattgttgaaattagacaactacaaggaatttgtctactctgactggtgttgt
tccaaaattcgtaaggagctcaacatgtcggatatcgatttgttcaaaatcgtagcaaag
aaactcatatcgcttaccgatgataacagaaactacatttctgttcaagctatttctgag
gtagctcatgaggagggaagaatcaatctttgtaaattgttggtgaatttagaaccctcg
attgagaagaagatccaacagttcttacaatttgaagaagttgaacttgccttgctcaag
gcttttcaaactggcgactatgatatagctaagatcatattgttgcatttgcgggacact
ctttccatttcccaatttttcagggtgttaaatcagaacgaacaaacagaatccatcacc
gatctttcgactgaagaactaaacaaattggatatcaccattccgtcagagaagctttcc
atcagtggtgacttgattgggaatttctgggttaactctgctggcaagttcgattctaag
atgctttcaacctattacaaacaagaagacaaaaataatgaactcaatacgtttaaattg
aaagtttatttgagtggaaacaaagattctcaagctgacgaatattacgaaaactataaa
gccaagttgcagaagtccttgagtaccagtaataccaagagggtcaatcgcttgtttcaa
agagaactcgaagttttggaattgcaaaagaagctcggagaaatctacctcacacagttc
tatggcgaaaggtctttgaattccatcttggtcagacttattaaattgaaccaacttaaa
atggcatcgaaagtagtgaaggacttcaagattacccaggagaagtactggtatttggtg
ttgaatacctattcacaattgaaagaatttgatcgattatacgaatttgcagtgggaatg
gatcaggctgatagcagtagcctaaggtctcccattgggtttgagccattcgtggatgcc
tcgtttgctaatggtgcccctaaagatcatatctctacgtatatccgaaactccaatctc
aagtacactgacaaggtgaagaactatctcaagaatggggatttgaaatcggcggcacaa
gaaggtttcaaaaacaaggacattgatgtcttgagaagtttgctagaagcaacctccgat
acagatgaagaaacgaacaaggtcattaagtcgtatattacaaaactcggttactag
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