Scheffersomyces stipitis: PICST_84817
Help
Entry
PICST_84817 CDS
T01023
Name
(RefSeq) predicted protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic04120
Ubiquitin mediated proteolysis
pic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PICST_84817
04120 Ubiquitin mediated proteolysis
PICST_84817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_84817
Enzymes [BR:
pic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PICST_84817
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PICST_84817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_16
zf-ANAPC11
Prok-RING_4
zf-C3HC4_4
Rtf2
MDM1
Motif
Other DBs
NCBI-GeneID:
4839921
NCBI-ProteinID:
XP_001385552
JGI:
84817
UniProt:
A3LXT9
LinkDB
All DBs
Position
6:1019557..1021736
Genome browser
AA seq
568 aa
AA seq
DB search
MIPKGMQYLLGYTIISMASLAWASYDSLTKAVNFEVFLMEMTDGVKLGILINSVALNFVM
VGKILQLSLFGELRLLEADHLMEKLPFYAGNLLFNLATTDNFLLNSFLLVTAVGFKAFHI
ILIDRADYVNLRIANNSNNETYTRAIIIKKYVFNLYFWLVFFFIFLDFSIAKLLVYDVFQ
GINSVVCLLFGFEFAIQGVEALTYCAKMFINIYELAVYRINEHHDNSEDDDDFLDEDIDI
IWETKAFYSKGIDIASSSLMAVSYLAFIYLLTFHSVLSLPISMLQGTYSSLKQTYTEVRQ
LFAFIESSKRLDNQLRTATKEDLEATDNLCIICREDMNSVEDYETNFKKSLPARRRPKAL
PCGHILHMGCLKEWLERSDSCPLCRKKVFDPPDQNIQREEANHPQEQNQEEAQQHQLEEN
ENQAQREIPANPEDNQEEIEDQQQSEGSESQTKSDVKESSSLQIDNSSGADVVEGSSNNI
PDSSVATPSNPSGERQTIKLPPNSLLPPGWAVLPLKRTTFIESGGRVDYYVSFSRFQKGA
LKIRQVEPINNRIIYPFTQVKQDGEPEE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaagggaatgcagtacctactagggtacaccattatttccatggctctgttg
gcgtgggcatcatacgactcgttgactaaagcggtgaactttgaagtgtttttgatggag
atgaccgacggagtcaaacttggaatactcattaacagcgtggctttgaatttcgtgatg
gtagggaagattttgcaattgtcactctttggcgaattaagattgctagaagcagatcat
ttgatggagaaattgccgttctacgcgggtaatttgcttttcaatttggcgacaacagac
aattttttgctcaattcatttctacttgtaacggccgttggctttaaagccttccacata
atcttgatagacagagctgactacgtcaacttgagaatcgctaataattccaacaatgaa
acttacacgagagccataataatcaagaagtatgtgttcaatctctatttctggcttgtc
ttctttttcatattccttgatttctcaattgctaaattgcttgtctacgacgtcttccag
ggtataaattccgtggtctgtctcttgtttggcttcgagtttgccatacagggagttgaa
gccctcacttactgtgcaaagatgtttatcaacatctacgaattggcagtctatagaata
aatgagcaccacgacaatagtgaagatgacgacgactttcttgacgaagatatcgacata
atatgggaaacaaaagctttttacagcaaaggtatagacatagcatcatcgtctttgatg
gcagtatcatatctagctttcatctatttgttaactttccattccgtgttgtcccttcct
atatctatgctccaaggaacctattccagtttgaagcaaacctacacagaagtcaggcaa
ttatttgcatttatcgaatcttctaagcgtttggacaaccaacttcgaactgccacaaaa
gaagatttagaggcaactgacaacttgtgtattatttgtcgtgaagatatgaactcggtt
gaagactacgaaacgaatttcaaaaagagcctaccagccagaagaaggcccaaggcacta
ccatgtggtcatatattgcatatgggttgtttaaaagaatggcttgaaagatcagatagc
tgtccactctgtagaaagaaagtgttcgatcctcctgatcagaatatccaaagagaagag
gcaaatcatcctcaagaacaaaaccaagaagaagctcaacaacatcaattagaagaaaac
gaaaatcaagcacagagagaaattcctgcaaatcctgaggataaccaggaagaaattgag
gatcagcaacaatccgaaggaagtgaatcccaaacaaagagtgatgtcaaagagagctct
tcacttcaaatagataatagttcaggagctgacgtagttgaaggctctagtaacaacata
ccagattctagtgtcgcaactccgtctaacccttcaggtgaaagacaaaccatcaagctt
ccaccaaattctctattacctcctggttgggctgtattgccattaaagagaaccacattt
atcgagtcaggggggagagtcgattactatgtcagtttctcaagatttcaaaagggtgct
ttgaaaatacggcaagttgagccaattaacaatagaataatctatcccttcactcaggtc
aaacaagatggagaacccgaggagtaa
DBGET
integrated database retrieval system