KEGG   Scheffersomyces stipitis: PICST_84817
Entry
PICST_84817       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
pic  Scheffersomyces stipitis
Pathway
pic04120  Ubiquitin mediated proteolysis
pic04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PICST_84817
   04120 Ubiquitin mediated proteolysis
    PICST_84817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pic04121]
    PICST_84817
Enzymes [BR:pic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PICST_84817
Ubiquitin system [BR:pic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PICST_84817
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_16 zf-ANAPC11 Prok-RING_4 zf-C3HC4_4 Rtf2 MDM1
Other DBs
NCBI-GeneID: 4839921
NCBI-ProteinID: XP_001385552
JGI: 84817
UniProt: A3LXT9
LinkDB
Position
6:1019557..1021736
AA seq 568 aa
MIPKGMQYLLGYTIISMASLAWASYDSLTKAVNFEVFLMEMTDGVKLGILINSVALNFVM
VGKILQLSLFGELRLLEADHLMEKLPFYAGNLLFNLATTDNFLLNSFLLVTAVGFKAFHI
ILIDRADYVNLRIANNSNNETYTRAIIIKKYVFNLYFWLVFFFIFLDFSIAKLLVYDVFQ
GINSVVCLLFGFEFAIQGVEALTYCAKMFINIYELAVYRINEHHDNSEDDDDFLDEDIDI
IWETKAFYSKGIDIASSSLMAVSYLAFIYLLTFHSVLSLPISMLQGTYSSLKQTYTEVRQ
LFAFIESSKRLDNQLRTATKEDLEATDNLCIICREDMNSVEDYETNFKKSLPARRRPKAL
PCGHILHMGCLKEWLERSDSCPLCRKKVFDPPDQNIQREEANHPQEQNQEEAQQHQLEEN
ENQAQREIPANPEDNQEEIEDQQQSEGSESQTKSDVKESSSLQIDNSSGADVVEGSSNNI
PDSSVATPSNPSGERQTIKLPPNSLLPPGWAVLPLKRTTFIESGGRVDYYVSFSRFQKGA
LKIRQVEPINNRIIYPFTQVKQDGEPEE
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgatacctaagggaatgcagtacctactagggtacaccattatttccatggctctgttg
gcgtgggcatcatacgactcgttgactaaagcggtgaactttgaagtgtttttgatggag
atgaccgacggagtcaaacttggaatactcattaacagcgtggctttgaatttcgtgatg
gtagggaagattttgcaattgtcactctttggcgaattaagattgctagaagcagatcat
ttgatggagaaattgccgttctacgcgggtaatttgcttttcaatttggcgacaacagac
aattttttgctcaattcatttctacttgtaacggccgttggctttaaagccttccacata
atcttgatagacagagctgactacgtcaacttgagaatcgctaataattccaacaatgaa
acttacacgagagccataataatcaagaagtatgtgttcaatctctatttctggcttgtc
ttctttttcatattccttgatttctcaattgctaaattgcttgtctacgacgtcttccag
ggtataaattccgtggtctgtctcttgtttggcttcgagtttgccatacagggagttgaa
gccctcacttactgtgcaaagatgtttatcaacatctacgaattggcagtctatagaata
aatgagcaccacgacaatagtgaagatgacgacgactttcttgacgaagatatcgacata
atatgggaaacaaaagctttttacagcaaaggtatagacatagcatcatcgtctttgatg
gcagtatcatatctagctttcatctatttgttaactttccattccgtgttgtcccttcct
atatctatgctccaaggaacctattccagtttgaagcaaacctacacagaagtcaggcaa
ttatttgcatttatcgaatcttctaagcgtttggacaaccaacttcgaactgccacaaaa
gaagatttagaggcaactgacaacttgtgtattatttgtcgtgaagatatgaactcggtt
gaagactacgaaacgaatttcaaaaagagcctaccagccagaagaaggcccaaggcacta
ccatgtggtcatatattgcatatgggttgtttaaaagaatggcttgaaagatcagatagc
tgtccactctgtagaaagaaagtgttcgatcctcctgatcagaatatccaaagagaagag
gcaaatcatcctcaagaacaaaaccaagaagaagctcaacaacatcaattagaagaaaac
gaaaatcaagcacagagagaaattcctgcaaatcctgaggataaccaggaagaaattgag
gatcagcaacaatccgaaggaagtgaatcccaaacaaagagtgatgtcaaagagagctct
tcacttcaaatagataatagttcaggagctgacgtagttgaaggctctagtaacaacata
ccagattctagtgtcgcaactccgtctaacccttcaggtgaaagacaaaccatcaagctt
ccaccaaattctctattacctcctggttgggctgtattgccattaaagagaaccacattt
atcgagtcaggggggagagtcgattactatgtcagtttctcaagatttcaaaagggtgct
ttgaaaatacggcaagttgagccaattaacaatagaataatctatcccttcactcaggtc
aaacaagatggagaacccgaggagtaa

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