Scheffersomyces stipitis: PICST_86867
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Entry
PICST_86867 CDS
T01023
Name
(RefSeq) large subunit of transcription factor tfIIE
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_86867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_86867
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
PICST_86867
Prokaryotic type
Archaeal type
TFE
PICST_86867
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7685
Zn_Ribbon_TF
Zn_ribbon_TiaS
zf_UBZ
Zn_ribbon_8
DUF7573
Zn_ribbon_3
ADK_lid
Motif
Other DBs
NCBI-GeneID:
4851768
NCBI-ProteinID:
XP_001387097
JGI:
86867
UniProt:
A3GHL9
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All DBs
Position
1:complement(2779543..2780823)
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AA seq
391 aa
AA seq
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MDDVVKSLLRFVTRGFYSVPYVLIMDAVIKHSVLSEDDLIHLLSIKRKELRSLCNKLVDD
RLLVNHIQKEESGQPNGQPNGQPKFVTRTYFFIHVTEAIDSIKWKVHYIVNQLKQEMSHF
GNPQGYACPRCGKKVSQLDAISLLSEDKTEFLCDVCGGTLVEDDSSQQATLRQEKLEKLM
FQVDPIINYLKKIDESNIQDNDFETALIQAIPAQSTSTASYTISNRISSRSRSNMSSSLQ
NAASKSQATLHVSITANDENYEREQMEKERRRQKLEQNALPSWHSNSTVGKSSLGRLVDE
DDYSREGTPSGIKQENEDNMDIDTTNNSIEPSTGQSSVAPTPEPKAALSEIKDKEQQDAL
AAYYSQLAEREAEEDEDDDDDDDEDDFDDLI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtggtcaagtcgcttctccggttcgtcacccgcggattctacagcgtcccg
tatgtgctcatcatggatgctgtgatcaagcattctgttctctctgaagatgacttgatc
catcttctcagcatcaagagaaaggagcttcgatcgctctgcaacaagttggtagacgat
cgtcttctcgtaaaccacattcagaaggaagagagcggtcagccaaacggtcagccgaac
ggtcagccgaagtttgtcactaggacgtacttcttcatacacgtgacggaagccatagac
tccataaaatggaaggttcactacatcgtaaaccagctcaaacaggagatgtctcatttc
gggaatccccagggttacgcttgccctcgatgtggtaaaaaagtcagtcaacttgatgca
atttccttgctaagcgaagacaagactgagttcctatgtgacgtttgcggcggaactcta
gttgaagacgattcaagtcaacaggcaacactcagacaggagaagttggagaagttgatg
tttcaagttgatcccatcatcaactacttgaagaagatcgatgaatctaacattcaggac
aacgacttcgagacggccttgatccaggcaatcccggcacaaagcacttccacagcttct
tatactatatcgaaccgtatcagctccaggtctcgttcgaacatgtcgtcgtctttgcag
aatgcagcttcaaagtcacaggctacattgcatgtgtctattactgccaatgatgagaac
tatgaacgggaacagatggagaaggagagaagaaggcagaagttggaacagaatgcatta
ccatcatggcattctaattcaacagtaggaaaaagttcattaggcagattggtagacgag
gacgactacagtcgcgagggaacgccgtctggtatcaaacaggaaaacgaagataatatg
gatatcgacacgactaacaactctattgagcccagcaccggtcagtcatcagtggcacct
actcctgagccgaaagctgctctctcagagatcaaagacaaggaacaacaagatgctttg
gccgcttattattctcaattggcggagcgtgaggctgaagaagacgaggacgatgacgac
gatgatgatgaagacgatttcgatgacttgatatag
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