Scheffersomyces stipitis: PICST_87680
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Entry
PICST_87680 CDS
T01023
Symbol
SSC1.1
Name
(RefSeq) Nuclear-encoded mitochondrial protein member of the heat shock protein 70 (HSP70) family
KO
K04043
molecular chaperone DnaK
Organism
pic
Scheffersomyces stipitis
Pathway
pic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PICST_87680 (SSC1.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_87680 (SSC1.1)
03110 Chaperones and folding catalysts [BR:
pic03110
]
PICST_87680 (SSC1.1)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_87680 (SSC1.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_87680 (SSC1.1)
Messenger RNA biogenesis [BR:
pic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PICST_87680 (SSC1.1)
Chaperones and folding catalysts [BR:
pic03110
]
Heat shock proteins
HSP70 / DNAK
PICST_87680 (SSC1.1)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
PICST_87680 (SSC1.1)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
PICST_87680 (SSC1.1)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PICST_87680 (SSC1.1)
Exosomal proteins of breast cancer cells
PICST_87680 (SSC1.1)
Exosomal proteins of colorectal cancer cells
PICST_87680 (SSC1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
BcrAD_BadFG
wHTH-PRTase_assc
DUF1464
Cation_ATPase_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
4837185
NCBI-ProteinID:
XP_001383082
JGI:
87680
UniProt:
A3LPI8
LinkDB
All DBs
Position
2:complement(1594770..1596928)
Genome browser
AA seq
650 aa
AA seq
DB search
MLRTSLPRQISLASRIFQRKFHSVIGIDLGTTNSAVAIVEGGEAKILENEEGGRTTPSIV
SFSKRGQDEEVLVGLAAKRQAAINPENTFFATKRLIGRKYEDDEVQRDLKNVPYKIFPHS
NGDAWLSTTYGKQMSPPQISALILKKMKEVAESNLSKDKLPIKHAVVTVPAYFNDAQRSA
TKKSGKLVGLDVLRVVNEPTAAALAYGIDKKQSDGIVAVFDLGGGTFDISILDIEDGVFE
VRATNGNTHLGGEDFDILLLNYILDTFKKENGGLDLSNDRFAVQRIREAAEKAKIELSHV
KETEINIPFIVKDKHISIKLTEDELDQMSLHLINKTIDPVKRCIRDAELKIKDIDEVILV
GGMTRMPKLRKVVEELFNKKPNTAVNPDEAVALGAAIQGAVLSGQIKDVILLDVTPLSLG
IETYGGIFSPLIPRNSAVPVKKEQIFSTAVDGQTGVEIRVYQGERSLVKDNKLIGNFKLS
NIPLGPKGTPQIAVNFQIDADGIINVTATDKTPYPKDSEFYNKPNTVSIQVSGETGLSEE
EVKRILEESEKNKLLDEKLRKYYEHASRAEILCTDTDNALAQFGELMEQIERESISAKKD
AIRVKINDIRENKILHDPVVLNEEVNAMQNECLQAIRKVAAKQQEQQKNV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacaagtctcccaaggcagatcctgctagcaagtcggatttttcagcggaaa
ttccattcagtgattggtatagacttgggaactaccaattctgctgtggcaattgtggaa
ggtggagaagcaaagatcttggaaaacgaagaggggggaagaaccacaccttctatagta
tctttctccaagcgaggacaagatgaggaagttctagtaggattagcagctaagaggcaa
gcagccattaacccggaaaacactttttttgccaccaagagactcattggccgtaaatac
gaagacgacgaagtccaacgtgacttgaagaatgttccctataagattttccctcattct
aatggagacgcctggttaagcactacgtatgggaaacagatgtctccgcctcagatcagt
gctttaatcttgaagaaaatgaaagaggtagcggaaagcaatctcagcaaagataagtta
cctatcaagcatgctgtagtgactgtgccggcatatttcaacgatgcccagagactggct
accaagaagtctggcaaactcgtaggcttagacgtattgcgcgtagtaaatgaacctacg
gctgctgctttggcttacggtatagacaagaaacagagcgacggaattgttgcggtgttt
gacttaggaggaggtacgtttgatatctctatcttggacatagaagacggcgtatttgaa
gtcagagccactaatggaaacacccatttgggaggtgaggactttgacatccttctcttg
aactatatcttggatacgtttaaaaaagagaacggcggactcgatttgctgaatgatagg
ttcgctgttcagagaattagagaagcagcagaaaaggccaagatcgagctttctcatgtc
aaagaaacagagatcaacattccattcattgtcaaagataaacacatcagtatcaagttg
accgaggatgagttggatcaaatgtctttgcatttgatcaataaaaccatcgatccagtc
aagagatgtattagagatgccgagttgaaaattaaggatatcgacgaggttattttggtt
ggtggaatgaccagaatgccaaaattgagaaaggttgtagaagagttgttcaataagaag
cccaacacggctgtaaatccagacgaagcagttgctcttggtgcggctatccaaggtgct
gttttgtctggtcagataaaggatgtgatcttattggatgtgactcccttgtctttaggt
atagaaacttacggtggtattttcagtccattaattcccagaaactcggcggtgcctgta
aagaaagaacagatattttcgactgctgtagacggacaaactggtgtggaaattagagta
taccagggcgaaagatctcttgtcaaagacaacaaattgataggaaacttcaaattatcc
aatattcctcttgggcccaagggtactccacaaatagccgtcaactttcaaattgatgct
gatggaatcatcaatgtaacagccactgataagacaccatatcccaaagacctggagttc
tataataagcctaacactgtttccatccaggtttcaggcgaaaccggactttcagaagaa
gaagtaaagcgtattctagaggaaagcgagaagaacaaacttcttgacgaaaagcttcgg
aaatactacgaacatgcttcaagagctgaaatattatgcaccgacacagacaatgcgctt
gcccaatttggagaattgatggaacagatagaaagagagtcgatatcggctaagaaagat
gccatcagagtcaagatcaatgatatcagagagaataaaattcttcacgaccctgttgtt
ctcaatgaagaggtcaatgccatgcaaaacgaatgtctccaggcaattagaaaagtagct
gccaagcaacaggaacagcagaagaatgtataa
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