Scheffersomyces stipitis: PICST_87852
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Entry
PICST_87852 CDS
T01023
Name
(RefSeq) TATA-binding protein-associated factor
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_87852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_87852
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_87852
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PICST_87852
Coactivators
SAGA/TFTC/STAGA complex
PICST_87852
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PICST_87852
STAGA complex
PICST_87852
TFTC complex
PICST_87852
SAGA complex
PICST_87852
SLIK complex
PICST_87852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
DUF5847
Motif
Other DBs
NCBI-GeneID:
4837462
NCBI-ProteinID:
XP_001383179
JGI:
87852
UniProt:
A3LQ48
LinkDB
All DBs
Position
2:complement(2174447..2175987)
Genome browser
AA seq
494 aa
AA seq
DB search
MESSSKIPLSYSLWSPHDTVKDAAESLSINLPEEAAKNLAMDVEYRIHEILETAIKFMRH
SKRKLLMTSDISNALKVLNIEPLYGYDNSQPLVFKEALVGAGGQTLYYIDDNEIELEKLI
NQELPKVPRQTTFTAHWLAIEGVQPMVAQNPLPAEIKSLPPIIRGATSSILGNDILSLGQ
NGENKDSAQGSAATKDKKATEKQSEVKPLVKHVLSKELKLYFDKVVEVLISTDPEKENLK
VAALNSLKNDPGLHQLVPYFIQFVAEQITNQLRNIDILSTMLEVISALADNKTIFLDPYV
HALMPCILTLLLAKRIGPVIRETSSKESQDTLKTQLAVREFAAFLLEHIIKVYGSSYSTL
RPRVTRTLLRALLDSTKPVGTHYGALLGLKNMGTEVVKLVLIGNLKVWCKSVVENSDKTD
FEKDILLNESLEILDSLKVELPQDEESMDTDSGFSEEIKNKLKDRIGDTLADLVLQHRDA
KDIVRGLFFGEVVV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagtctgaagatacccttgtcgtactcgttgtggtctccccatgacaccgtc
aaagatgctgcggagctgctcagtatcaatttgccagaggaggcagccaagaatcttgcc
atggatgtcgagtaccgtatccatgaaatcttggaaacagccattaaattcatgagacac
tcgaaaagaaagttgctcatgacttcagacataagtaacgccttaaaagtattgaatatt
gagcccctttatggctacgacaattcgcaaccgttggttttcaaggaagccttggttggt
gctggaggacagactttgtattatatagatgataatgagattgaacttgaaaagttgatc
aaccaggaattaccaaaagtgcctcgtcaaaccacctttactgctcattggcttgctatt
gaaggagtccaaccaatggtggcgcagaatcctcttcctgccgaaatcaagagtctccct
ccgataataagaggtgccacttcgtccattcttggaaacgatattttatcgcttggccaa
aacggcgaaaacaaggactcagcacaaggatctgctgctaccaaagacaagaaggccacc
gagaagcaatcagaagtcaagccgttggtcaaacacgtattgtcgaaggaactcaagttg
tattttgacaaggttgtagaagttctcatttcgacagatccagaaaaggagaacttgaag
gtagctgccttgaactcgttgaagaatgacccgggtttgcaccagttggtgccttatttc
atccaattcgtggccgaacagatcacaaaccagttgaggaacattgatatcttgtccaca
atgttggaagtgatttctgctctcgctgataacaagactattttcctcgatccttatgtc
catgctcttatgccttgtatcttgacgttgttattggctaagagaataggtcctgtgatc
agagaaacctcctccaaagagtctcaggacacgttgaaaacacaattggccgttagagaa
ttcgctgcctttttgctagaacacattatcaaggtttacggctcttcgtactcgactttg
agacccagagtgacaagaacgttattgcgtgcgttgttagattctacaaaaccagtaggt
acgcattatggtgcccttttggggttgaagaatatgggcacagaagttgtcaagttggtc
ttgataggcaacttgaaagtttggtgcaagctggtagttgagaacagcgataagaccgac
tttgaaaaggatatcttgctaaatgaatcgctagaaattttggatagccttaaagtggaa
ttaccccaagatgaagagtctatggatacagactccgggttttcagaagaaattaagaac
aagttgaaagacaggattggtgatactctcgccgacttagttttgcaacacagggatgca
aaagacattgtcagaggtctattctttggcgaagttgtcgtctag
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