KEGG   Scheffersomyces stipitis: PICST_88096
Entry
PICST_88096       CDS       T01023                                 
Symbol
RPA49
Name
(RefSeq) RNA polymerase I alpha subunit
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
pic  Scheffersomyces stipitis
Pathway
pic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PICST_88096 (RPA49)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_88096 (RPA49)
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     PICST_88096 (RPA49)
SSDB
Motif
Pfam: RNA_pol_I_A49 DMAP1 SPOR ATP-cone FlgT_C
Other DBs
NCBI-GeneID: 4836639
NCBI-ProteinID: XP_001382241
JGI: 88096
UniProt: A3LMU0
LinkDB
Position
2:56859..58208
AA seq 415 aa
MSGVKRPRESKTNEIRIASYAEEPSAVVGSFFNGLSVPTSTEFDLYKHKKSDKYVVHGET
ETLDYNGESLADESNDYFVALYDPLNKSVDLYKAPFVDAKVTARTKRVFKGPSVRQAGVR
NVTQRNALGEAFGTKKAKAAITNLEKNRIDSEKLQDIELDIVDNVKSSTQDLPTREKMAE
SVTNDRPTPLANVDATNVEDIYPLVNIIPKKDWTFLRIGPFLSEEDEKKRIELLPYSGSN
YINKHLTLLVAQKNSEKLQVLIYASLLFGVYENRRVRDKQSLMTRLQNKPSEVLVDGILE
KFAIARSSQVGKSKDRSFVIDPHHEDMLLCYLLALILHIDNFMVELPPLANELNMKPTRL
TGLFKALGAVIKAATVGQAEAFGIPKAAASTYKIASLKVPFKLPEMTRRGKRGGR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtcgggagtcaagagaccaagagaatcgaagacaaacgaaattagaattgcctcttat
gccgaagagccatctgctgtggttggatcattcttcaatgggttgtctgttcctactctg
actgagtttgacttatacaaacataagaaatctgataaatatgttgtccatggtgaaacg
gaaactttagattacaatggagagagtcttgctgacgagctgaacgactattttgttgca
ttgtacgatccattgaacaagtctgttgatttgtacaaggctccatttgtcgatgccaag
gtcacagcaagaaccaagcgtgtgttcaaaggtccttctgttagacaagctggtgtcaga
aatgtcactcaacgtaatgcattgggtgaagctttcggtaccaagaaagctaaggctgcc
atcaccaacttggaaaagaacagaattgattctgagaagttacaagatattgaattagat
atcgtggacaacgtcaaactgtcaacccaagatttgccaaccagagaaaagatggccgaa
agcgtcaccaacgacagacccactcctttggctaacgtcgacgctacaaacgttgaagat
atctacccattagtcaatataataccgaagaaggactggactttcttgcgtattggtcct
ttcttgagcgaggaagatgaaaagaaaagaattgaattgttgccttacagtggctccaat
tacatcaacaagcatctcacattattggtagcacaaaagaactccgaaaaattgcaagtg
ttaatctatgcttcacttttatttggtgtctacgaaaacagaagagtcagagacaagcaa
tctttgatgaccagattacaaaacaaaccttctgaagtattagtagatggtatcttggaa
aagtttgctattgcccgttcttcccaagtaggtaagtcgaaggaccgatcttttgtcatc
gatcctcatcacgaagatatgttattgtgttacctattggcccttatccttcacatagac
aacttcatggtcgaattgccaccattggctaacgagttaaacatgaagcctacaagatta
actggcttgttcaaggctttgggtgcggtaatcaaggctgccactgttggccaagccgaa
gcctttggtattccaaaggccgctgcaagcacctacaagattgcttccttgaaggtccct
ttcaagttaccagaaatgaccagaaggggcaagcgtggtggtcgttga

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