Scheffersomyces stipitis: PICST_88879
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Entry
PICST_88879 CDS
T01023
Symbol
APL6
Name
(RefSeq) clathrin assembly complex beta adaptin component
KO
K12397
AP-3 complex subunit beta
Organism
pic
Scheffersomyces stipitis
Pathway
pic04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PICST_88879 (APL6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_88879 (APL6)
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Others
AP-3 complex
PICST_88879 (APL6)
Endosome - Golgi transport
PICST_88879 (APL6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
HEAT_2
HEAT_EZ
INTS1_R4
Cnd3
Cohesin_HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
4838978
NCBI-ProteinID:
XP_001384464
JGI:
88879
UniProt:
A3LTL8
LinkDB
All DBs
Position
4:complement(847657..850247)
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AA seq
817 aa
AA seq
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MTDSFAKFSSMLESAKDLTIEAAVSASSRLTDTPSGSRQVEIPKLLNSRSDRDILTGMKC
VIAATARGEDGLPYFADVVKNVTTSNESIRNLVLIYLTRYAEVEPDTALLSINSIQKSLN
EKNAISRAKAIRALAGIRISSILPIVLLCIKRTLTDPSPLVRSATAIAIGKAFDIDDLES
SSKKQMVEYLTKLLSDSDSSVVSTAIKTFYKLLPQFSTSSKIWDPIHGNFRRFCSIINEF
DEWSQGFLIDILTEYSRRFLPRPKLYSVDESNQVIDLPEDYSQIPFSAYEVSFDEDLNLF
LNSLKVLLYSRSESVILAVARAVYFLAPPSTFKDFQLSQPLVRIASTSRDSQISLFALQI
ISSISWKDQSIFVNNVKNFYVYPSDSFEVASSKLDILASLAQEKNIKYILEELKYYTLSS
RNSDIAREAIISIGRCSQLSPEWNRKILRWCLKQIQKTTGSILNELLTVVRYLIQQKNSF
TLNVANERDEIINTTYQLSLILRDSSLNLESDAKASIVWIIGEFTGVAENAIGPDVLRHL
IKGFSKEEETTRYQILMLAAKVASYEVKRIKTEAGDDEDIYNQRLGNSINYKMFQHALHL
AKYDNSYDTRDRARMLNILLNSSSSMSELATLFLQVPKPVPVVGSKKDASLVQARALEEY
LAIRDWSEADTLPKADIRKEAKVIFNSLGGAGISSFSSVEKSPTPPQMPTSRSISSESYL
NSRVPEKKQTYHLQSLDDFFGNDESEESSSEDEEDDEEEEEDEDEDEDENEDNEEDDDED
DEEDDEEVSSSDEEQDSHESDNYASDSDTKRALLSKE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcattcgcaaagttctcgtcaatgctagagtccgctaaggatctcaccatc
gaagccgcggtgtcggctctgtcccggcttaccgatacgccttctggtctgagacaggtg
gaaattccaaagttgttgaactcacgtctggaccgcgatatcttgacgggaatgaaatgc
gtgatagcagcaacagctagaggtgaagatgggttaccctactttgctgatgtggtgaaa
aacgtgacaacatccaacgaaagcattcgaaacttggtacttatctatttgacaagatat
gctgaagtagagccagacacagcattattgctgataaattcgatccaaaagtcattgaac
gaaaaaaatgccatatctcgtgccaaggcgatcagagcgttagcagggatcagaatctcg
tccattttgccaattgtattactttgtatcaaacgtaccctaacggacccttcaccactt
gtcagaagtgccacagccattgctatcggcaaggcctttgacatcgatgatttggaaagc
agttctaagaagcagatggtggaatatctcaccaagttgttgagcgatagcgactcttca
gtagtttctacagccatcaagacgttctataagctcttgcctcagttctctacctcttct
aaaatctgggatccaatccatggcaacttccgtcgtttctgctccataatcaatgaattt
gacgaatggagtcagggctttttgatcgatattctaacagagtactcgcgccgttttctt
cccagaccaaagctttatctggttgatgaatccaatcaagtcatagatttaccagaggat
tacagtcagattccgttctctgcttacgaagtatcgtttgacgaagatttgaatttattt
ctcaactcgttgaaggtgctcctctactcaagactggaaagcgtaatccttgcagtggct
agagcagtgtactttttggcgccgcctctgactttcaaagacttccagttgagccaaccg
cttgtacgaattgcatctacttctcgtgatagccaaatctccctctttgctctacagata
atctcgagtatcagctggaaggaccagtctattttcgtaaacaatgtaaagaacttctac
gtttatccttccgacctgtttgaggtagccagcagcaagctagatattctcgcatcattg
gcacaagaaaaaaatatcaagtacatcttggaagagttgaagtattacactttatcgtcg
agaaatagcgacatcgcccgggaagccataatatctataggcagatgttcacagctttcc
ccagaatggaacaggaaaattcttagatggtgcttgaaacaaatacaaaagacaacaggt
tccattttgaacgagttgcttaccgtggtgagatacttaattcagcaaaaaaacagcttc
acccttaacgtagcaaacgagagagacgagatcatcaatacgacataccagttgtcgttg
attctacgcgacagcagcttgaacttagaaagtgatgccaaagcaagcatagtctggatt
ataggtgaattcacaggggtggcagaaaatgccattggaccagatgtattaagacatcta
atcaaaggcttttccaaggaagaagaaactacaagataccagatattaatgcttgcggct
aaagtcgcttcttacgaagtcaaaagaattaaaactgaagctggagatgacgaagacata
tacaatcaacgccttggaaatagcattaactataaaatgtttcagcacgctttacattta
gccaaatatgacaattcctacgacacaagggacagagcacgaatgttgaatatcttatta
aattcaagcagctcgatgtcggaattggccacattatttttgcaagtaccaaagccagta
cctgtagtcggttctaagaaggatgcttctcttgttcaagccagggcattggaagaatat
ctcgccataagagattggtctgaagctgatacccttcctaaggcagatatcagaaaagag
gcaaaagtgattttcaatagtctcggtggcgccggaatatcgtccttctcaagtgtagaa
aagtcgcccacgcctcctcagatgccgaccagtcgttcaatctcttcagaatcttatctt
aattctcgtgtcccagagaagaagcaaacttatcacttgcaaagtttagacgatttcttt
ggtaatgacgaatcagaagaaagttccagcgaggatgaggaggacgacgaagaggaagag
gaagacgaggacgaggacgaggatgagaacgaggacaacgaagaagacgacgatgaagac
gacgaagaggacgatgaagaagtctcatcttcggacgaagaacaggattcacatgaactg
gacaattatgcctccgactcagacactaagcgagcattactttctaaggaataa
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