KEGG   Scheffersomyces stipitis: PICST_89002
Entry
PICST_89002       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
pic  Scheffersomyces stipitis
Pathway
pic04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PICST_89002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_89002
Membrane trafficking [BR:pic04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    PICST_89002
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 4838696
NCBI-ProteinID: XP_001384020
JGI: 89002
UniProt: A3LT23
LinkDB
Position
4:340514..343543
AA seq 970 aa
MVVSITEQKQILQSCLSAIKHQSNLMKQCLNENNILQALKHCSNFLNELRTNQLTPKQYY
ELYIAVFDSLETLSNHLLNSHNLKQHKLEKRQAALDSTSTSDKNADDKSTTHKNVKNGDE
ISKNAVGKSATTPFLADLYELVQYSGNIVPRLYMMIVIGTTYMSTKGAPGKEIMKDMIEM
CRGVQHPIRGLFLRYYLSQRTKHLLPFSNANDFNDTVEFLISNFIEMNKLWVRLQHQGHS
SERELRYRERKELKILVGSNLVRLSQVIDDYNGDETYSSIKYYQDKVFPTITEQIIQCRD
HLAQSYLIDVLIQIFPDDFHFATLDSLLSDVFLNLHPLLKKSELVATLIERFITYHKFES
DMSTSEIKELSLESDEKQKKIKTTIDSTQLFNSFWKFYLKLYELDPQLPSEEHSELLQSF
IRLSLTYDPNNYQNLDVVYKFATEKEGQIKANAENDDIWLQLLIVPIRHFDSIKTLFKLP
FFHEFYLKLSNKQHQKQISLEIINKLLGITTYGDEDGNTVQEIHEPETFTTTEEVDGIFK
YLLVLIKDSDKQNSTSKNLGVTKSITINKGENVISHEFLSNQEKICKVIHLIENPSDPFK
NLSNLMYARKKYLNKNFDNIIYTYPTLISRILYKLKIVGYANLRQQKKKKNTEASQDLMI
TSNFKNLSIIIDELYQYHAEFNSELILKIYLNAASVADQLKQESICYELYTQCFIVYEEN
LILGSSSYQQHINPHDSLAGGSLQYQSIIHVANKLVSARYFNKENYENLITKLTLYGSKL
LKKQDQCRAVYSCSHLWWWCELLIEHGEKSPTVQPEAAKEKSAKENIQKDEDQSSRDREE
ADDEEDEIELYRDAKRVLECLQKSLRVADSCMDPYLSLKLFVEILNQCLIFNIYGNALAD
SRYINGLIDLIRTNIDNLRDDDNNAKTDAADEEDDKEARLFKQSVGYFERTLSYIRDQQE
VENRFEGIVV
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggttgtctctatcacagagcagaaacagattctccagagctgtctctcggcgattaag
caccagtctaatctaatgaaacaatgcctcaacgagaacaacattcttcaggctctcaag
cattgctccaacttcctcaacgagctacggaccaatcagttaacaccaaaacaatactac
gagttgtatatcgctgtttttgactctcttgaaaccctcctgaaccatttactcaactcg
cacaatctcaaacagcacaagcttgagaagagacaagctgctttggatagcacctcaact
tcagacaaaaatgccgatgataaaagcactactcataaaaatgttaaaaatggtgatgaa
atttcaaaaaatgctgttggaaaaagtgctacgactccattccttgcagatttgtacgag
cttgttcaatactccggcaacatcgtaccccgtctctatatgatgatcgtcattggcaca
acatatatgtcgacgaaaggagctcctggcaaagagatcatgaaagatatgatcgagatg
tgtcgtggagtacagcatcctattcgaggcttgtttttgcgttactacttgtcgcagaga
acgaagcatttgcttccgtttctgaacgccaatgacttcaacgacactgtagagtttctc
atttccaacttcatcgagatgaacaagttgtgggtgcgtttgcaacaccagggtcattcg
tcggaacgtgagttgagatacagagagagaaaggaattgaagatcttggtaggttccaac
ttggtcagattatcgcaagtcattgacgattacaacggcgacgaaacctactccagcatc
aagtattaccaggataaagtatttcctaccatcacagaacagattattcagtgtcgtgat
catcttgcccagagctatttgattgacgttttgatccagatctttcctgatgactttcac
tttgccacgttggacagcttgcttagtgatgttttcctcaatttgcatccgttgttgaag
aagagcgagttggtagccacgttgatcgagagattcatcacctatcacaaatttgagtcc
gatatgtctacaagtgagatcaaggagctttctttggaaagcgatgagaaacagaaaaag
attaaaacgactattgattccacgcaattgttcaattctttctggaaattctacttgaaa
ttgtatgaattagatccacaattaccttcagaagagcattctgagttgctacaatcgttt
attagattgtcgttaacgtacgatcctaacaactaccaaaacttggatgtagtctacaaa
tttgctactgagaaagagggccaaatcaaggctaatgccgagaatgatgatatttggttg
caattgttgattgttcctattcgtcactttgattccatcaagaccttgttcaagttgccc
ttcttccacgagttctatttgaagttgtccaacaaacagcaccagaaacagatatcgtta
gaaatcatcaacaaattgctaggaataactacctatggagatgaagatggtaataccgtc
caagagattcacgagccggagactttcaccaccactgaagaggtagacgggattttcaag
tacttattggtcttgatcaaagattctgacaagcaaaacagtacctccaagaacttgggg
gtcacaaagagcataaccatcaacaaaggagaaaatgtgatttcgcatgagttcttgagc
aaccaggagaagatctgtaaagttattcatttaattgaaaaccccagtgatccttttaag
aacttgtccaatttaatgtacgccagaaagaagtacttgaacaagaactttgataacatc
atatacacctatccaactttgatctcacggatcttgtacaaattgaagattgttggttat
gctaatttgagacagcagaagaagaagaagaacactgaggccagccaagacttgatgatc
acttccaactttaaaaatttatctataataattgatgagttgtaccaataccatgctgaa
ttcaactcagaattgattctcaagatttatcttaatgctgcttcagttgctgaccagttg
aaacaagaatcaatttgctacgaattgtacacgcagtgtttcattgtatatgaagaaaac
ttgattcttggatccagtctgtaccaacaacatatcaatcctcacgactcgcttgctgga
ggttcgttgcaatatcaatccattatacatgtagccaacaaactagtttctgctcgttat
ttcaacaaggagaactacgagaacttgataacaaagttgacgttgtatggatcgaaatta
ttgaaaaaacaggaccaatgcagagctgtctattcttgctcccatttgtggtggtggtgc
gaattgctcattgagcatggagaaaagtcgcctactgtccaaccagaggctgcaaaagag
aaactggcaaaggaaaatatacaaaaagatgaggaccagtcatccagagatcgcgaagag
gctgatgatgaagaagatgaaattgagttgtatcgtgacgcgaagagagtcttggagtgt
ttacagaagtctctcagagtggcagattcgtgtatggatccctatttgctgttgaagctc
ttcgttgagatcttgaaccaatgtctaattttcaatatttacggaaatgcattggctgat
tcacgctacataaatggactcatcgacttgattagaacaaacatcgataatcttcgtgat
gacgacaacaatgcaaagacagatgctgcagacgaggaggatgacaaagaggctcgtttg
tttaaacagagtgtaggctattttgaacgcaccttgtcttacataagagaccaacaggaa
gtggaaaatcgatttgaggggattgtcgtgtga

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