Scheffersomyces stipitis: PICST_89002
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Entry
PICST_89002 CDS
T01023
Name
(RefSeq) predicted protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pic
Scheffersomyces stipitis
Pathway
pic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PICST_89002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_89002
Membrane trafficking [BR:
pic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
PICST_89002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
4838696
NCBI-ProteinID:
XP_001384020
JGI:
89002
UniProt:
A3LT23
LinkDB
All DBs
Position
4:340514..343543
Genome browser
AA seq
970 aa
AA seq
DB search
MVVSITEQKQILQSCLSAIKHQSNLMKQCLNENNILQALKHCSNFLNELRTNQLTPKQYY
ELYIAVFDSLETLSNHLLNSHNLKQHKLEKRQAALDSTSTSDKNADDKSTTHKNVKNGDE
ISKNAVGKSATTPFLADLYELVQYSGNIVPRLYMMIVIGTTYMSTKGAPGKEIMKDMIEM
CRGVQHPIRGLFLRYYLSQRTKHLLPFSNANDFNDTVEFLISNFIEMNKLWVRLQHQGHS
SERELRYRERKELKILVGSNLVRLSQVIDDYNGDETYSSIKYYQDKVFPTITEQIIQCRD
HLAQSYLIDVLIQIFPDDFHFATLDSLLSDVFLNLHPLLKKSELVATLIERFITYHKFES
DMSTSEIKELSLESDEKQKKIKTTIDSTQLFNSFWKFYLKLYELDPQLPSEEHSELLQSF
IRLSLTYDPNNYQNLDVVYKFATEKEGQIKANAENDDIWLQLLIVPIRHFDSIKTLFKLP
FFHEFYLKLSNKQHQKQISLEIINKLLGITTYGDEDGNTVQEIHEPETFTTTEEVDGIFK
YLLVLIKDSDKQNSTSKNLGVTKSITINKGENVISHEFLSNQEKICKVIHLIENPSDPFK
NLSNLMYARKKYLNKNFDNIIYTYPTLISRILYKLKIVGYANLRQQKKKKNTEASQDLMI
TSNFKNLSIIIDELYQYHAEFNSELILKIYLNAASVADQLKQESICYELYTQCFIVYEEN
LILGSSSYQQHINPHDSLAGGSLQYQSIIHVANKLVSARYFNKENYENLITKLTLYGSKL
LKKQDQCRAVYSCSHLWWWCELLIEHGEKSPTVQPEAAKEKSAKENIQKDEDQSSRDREE
ADDEEDEIELYRDAKRVLECLQKSLRVADSCMDPYLSLKLFVEILNQCLIFNIYGNALAD
SRYINGLIDLIRTNIDNLRDDDNNAKTDAADEEDDKEARLFKQSVGYFERTLSYIRDQQE
VENRFEGIVV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggttgtctctatcacagagcagaaacagattctccagagctgtctctcggcgattaag
caccagtctaatctaatgaaacaatgcctcaacgagaacaacattcttcaggctctcaag
cattgctccaacttcctcaacgagctacggaccaatcagttaacaccaaaacaatactac
gagttgtatatcgctgtttttgactctcttgaaaccctcctgaaccatttactcaactcg
cacaatctcaaacagcacaagcttgagaagagacaagctgctttggatagcacctcaact
tcagacaaaaatgccgatgataaaagcactactcataaaaatgttaaaaatggtgatgaa
atttcaaaaaatgctgttggaaaaagtgctacgactccattccttgcagatttgtacgag
cttgttcaatactccggcaacatcgtaccccgtctctatatgatgatcgtcattggcaca
acatatatgtcgacgaaaggagctcctggcaaagagatcatgaaagatatgatcgagatg
tgtcgtggagtacagcatcctattcgaggcttgtttttgcgttactacttgtcgcagaga
acgaagcatttgcttccgtttctgaacgccaatgacttcaacgacactgtagagtttctc
atttccaacttcatcgagatgaacaagttgtgggtgcgtttgcaacaccagggtcattcg
tcggaacgtgagttgagatacagagagagaaaggaattgaagatcttggtaggttccaac
ttggtcagattatcgcaagtcattgacgattacaacggcgacgaaacctactccagcatc
aagtattaccaggataaagtatttcctaccatcacagaacagattattcagtgtcgtgat
catcttgcccagagctatttgattgacgttttgatccagatctttcctgatgactttcac
tttgccacgttggacagcttgcttagtgatgttttcctcaatttgcatccgttgttgaag
aagagcgagttggtagccacgttgatcgagagattcatcacctatcacaaatttgagtcc
gatatgtctacaagtgagatcaaggagctttctttggaaagcgatgagaaacagaaaaag
attaaaacgactattgattccacgcaattgttcaattctttctggaaattctacttgaaa
ttgtatgaattagatccacaattaccttcagaagagcattctgagttgctacaatcgttt
attagattgtcgttaacgtacgatcctaacaactaccaaaacttggatgtagtctacaaa
tttgctactgagaaagagggccaaatcaaggctaatgccgagaatgatgatatttggttg
caattgttgattgttcctattcgtcactttgattccatcaagaccttgttcaagttgccc
ttcttccacgagttctatttgaagttgtccaacaaacagcaccagaaacagatatcgtta
gaaatcatcaacaaattgctaggaataactacctatggagatgaagatggtaataccgtc
caagagattcacgagccggagactttcaccaccactgaagaggtagacgggattttcaag
tacttattggtcttgatcaaagattctgacaagcaaaacagtacctccaagaacttgggg
gtcacaaagagcataaccatcaacaaaggagaaaatgtgatttcgcatgagttcttgagc
aaccaggagaagatctgtaaagttattcatttaattgaaaaccccagtgatccttttaag
aacttgtccaatttaatgtacgccagaaagaagtacttgaacaagaactttgataacatc
atatacacctatccaactttgatctcacggatcttgtacaaattgaagattgttggttat
gctaatttgagacagcagaagaagaagaagaacactgaggccagccaagacttgatgatc
acttccaactttaaaaatttatctataataattgatgagttgtaccaataccatgctgaa
ttcaactcagaattgattctcaagatttatcttaatgctgcttcagttgctgaccagttg
aaacaagaatcaatttgctacgaattgtacacgcagtgtttcattgtatatgaagaaaac
ttgattcttggatccagtctgtaccaacaacatatcaatcctcacgactcgcttgctgga
ggttcgttgcaatatcaatccattatacatgtagccaacaaactagtttctgctcgttat
ttcaacaaggagaactacgagaacttgataacaaagttgacgttgtatggatcgaaatta
ttgaaaaaacaggaccaatgcagagctgtctattcttgctcccatttgtggtggtggtgc
gaattgctcattgagcatggagaaaagtcgcctactgtccaaccagaggctgcaaaagag
aaactggcaaaggaaaatatacaaaaagatgaggaccagtcatccagagatcgcgaagag
gctgatgatgaagaagatgaaattgagttgtatcgtgacgcgaagagagtcttggagtgt
ttacagaagtctctcagagtggcagattcgtgtatggatccctatttgctgttgaagctc
ttcgttgagatcttgaaccaatgtctaattttcaatatttacggaaatgcattggctgat
tcacgctacataaatggactcatcgacttgattagaacaaacatcgataatcttcgtgat
gacgacaacaatgcaaagacagatgctgcagacgaggaggatgacaaagaggctcgtttg
tttaaacagagtgtaggctattttgaacgcaccttgtcttacataagagaccaacaggaa
gtggaaaatcgatttgaggggattgtcgtgtga
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