Scheffersomyces stipitis: PICST_89007
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Entry
PICST_89007 CDS
T01023
Name
(RefSeq) predicted protein
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_89007
Membrane trafficking [BR:
pic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
PICST_89007
Protein recycling
Other Rab GTPase associated proteins
PICST_89007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
CUE
Motif
Other DBs
NCBI-GeneID:
4838891
NCBI-ProteinID:
XP_001384436
JGI:
89007
UniProt:
A3LTH4
LinkDB
All DBs
Position
4:complement(727827..730349)
Genome browser
AA seq
746 aa
AA seq
DB search
MTLNNSQLGFNISKATPTTSTTNTNTTSTPPSSAPSIEPSHSPVGGGVGVKSSFFQNILS
KSSTTVSATTEAPSTPTETVAGSQGDPATPVYDFNGSLAKPTANSSSVGVKSDLIGLFDK
FDISSSEQKQPESNSQQLSDGLDHAEEHTLDESKSVSEESKEKSHLEKEDDGNSTQDTFG
AEQSSKDESQQIETVEKNVAPIITIPRTRTEAKTEDVDFELEDSRESELIQQEESEESGP
KEKNQEAQDVQGLSLPSTEESRNIKRKDLIDITGDVEEQSSEVEEFVLKVEETRPSINRV
DSNRPRHDSHISSKINQSKVDPEEQYQQSHRPFDFQHFLAQLRRKSADPVVRYIRSFLVN
FSRQGHTFTADQRINILVEFKKFMNDKFTLYEPFASMDEIDLENSREGLEKLIMNRLHIH
CFPPEVSRNGGYLPEPYVKDLDDDNNFATTLEKFSWVNGTHLDIEVDELSTLMKGEVSFM
DYGIAELNKINKYRAPRDKIICILNACKIIFSYLKVSNQETNADAFIPLLILIIIKAKTD
HLISNIHYIEGYRGEEWLLHGETSYYLSSLQAAIGFIQNLGFDELTITEEEYNAHMEAWD
AEEKQRAIIRGANKDIRQPQPQRIPLPTEQSVNQQSLSPSSVLLSSAEMFTKSISNFLSP
SPSEQMRIESELPAQLREPVVLNHHELIQPQTPQPSEVDSERLKEVYNNVKEIFPTIDTS
ILKDLVYINRGDIDKCIDACLQFMGE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaacaacagccagttggggttcaacatctctaaagctactcctaccacctcc
actaccaacacaaacaccacgtcaacgcctccgtcttcggctccgtctatagaacccagt
cacagtccggtcggtggtggagttggagttaaatccctgtttttccagaatatattgctg
aagagttcaacaactgtttctgccacaaccgaggctccttccactccaaccgaaactgta
gcaggttcccaaggcgatccggcaacgccagtatacgatttcaacggtagtttagccaag
ccaaccgccaactcgagcctggtgggtgttaagtcggacttgataggtttatttgataaa
ttcgatatttctctgtctgaacagaaacagcccgaatcgaacagccagcaattgtcagat
ggtttggaccatgcagaggaacacaccttggatgagagcaagctggtgagcgaagaaagc
aaggaaaagagccatttggagaaagaagacgatggcaattcaactcaagacacatttgga
gctgaacagctgtcaaaagacgaatcccagcagatagaaaccgtagagaaaaatgtcgct
cctataataaccataccgcgaacgcgcacagaagcaaagacagaagacgtagactttgaa
cttgaagattccagagagtctgagttgatacaacaggaagagtctgaagaatctggacca
aaggaaaagaatcaagaggctcaagatgttcaagggttgtctcttccatctactgaagag
tctcggaacataaaacgaaaagatctcatagacataacgggtgatgtagaagaacaaagt
tcggaggtagaggagtttgtattgaaggttgaagaaactcgtccgtccatcaacagagta
gattccaataggcctcgtcatgattcgcatatatcctctaagatcaaccagtccaaggtc
gatcctgaagagcagtaccagcagtcacacagaccgtttgatttccagcattttctcgct
caattgcgaagaaaaagtgcagatcctgtagttcgctatattcgatcgtttttggtcaat
ttctcacgtcaaggccatacattcactgctgaccaaagaatcaatatacttgtagagttc
aaaaaattcatgaatgacaagttcacactatatgagccctttgcctctatggatgagatt
gacttggaaaattcacgagaaggcttggaaaagcttatcatgaacagattgcacatccat
tgcttcccacctgaagtgtctcggaatggaggctatcttcccgaaccatatgtaaaagat
ttggatgatgacaacaactttgccaccacgttggagaagttcagttgggtcaatggtacc
catttggatatagaagtggatgaattgtctaccttgatgaaaggtgaagtcagctttatg
gattatggcatcgctgaattgaacaagatcaacaagtacagagctcctagagataagatc
atctgtattttgaatgcttgtaaaataatattcagttaccttaaagtgagcaaccaggaa
acaaacgcagatgccttcattccgttgttgattcttattatcattaaggctaagacagac
cacctcataagcaacatacactatatagaaggctacagaggtgaagaatggttacttcac
ggggaaaccagttactatttgtcatccctacaggcggccattggcttcatccagaactta
gggtttgatgagttgacaatcacagaagaagaatacaatgcccatatggaagcatgggac
gcggaagaaaaacaaagagctataattagaggagccaataaagatattcgtcaacctcaa
cctcagagaattccattgcccacggaacaatcggtaaaccaacaatcattgtcaccatct
agtgttctcctttcaagtgcggaaatgttcaccaagtcgatttccaacttcttatcacca
tcaccactggaacagatgagaatcgaatcagagcttccagctcaattacgtgaacctgtt
gtgctcaaccaccacgaattaatacagccgcagacaccacaaccgtcagaagtagattca
gagagacttaaagaagtatacaacaatgtcaaggaaattttccctactattgatacttcc
attctcaaggacttggtatatatcaacagaggggatatcgataagtgtatcgatgcctgt
ttgcaattcatgggcgagtag
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