Scheffersomyces stipitis: PICST_89086
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Entry
PICST_89086 CDS
T01023
Name
(RefSeq) predicted protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03430
Mismatch repair
pic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PICST_89086
03460 Fanconi anemia pathway
PICST_89086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_89086
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PICST_89086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Cas9_C_2
Motif
Other DBs
NCBI-GeneID:
4838401
NCBI-ProteinID:
XP_001384344
JGI:
89086
UniProt:
A3LSY2
LinkDB
All DBs
Position
4:complement(<215562..>218096)
Genome browser
AA seq
736 aa
AA seq
DB search
MPIQRLSESVINRIAAGEIIIQPVNALKEMLENSIDAGASSIDIVVKDGGTKLLQIADNG
HGIAKEDLPLLCERFATSKLSRFEDLESIQTYGFRGEALASISHIARLSVVTKTATSAVA
YKAFYANGKLSGQNFKSSANTEPKPVAGKVGTQITVEDLFYNLPQRLKGLKSKSDEFSRI
LDVIGRYAIHCKDVGFSCKKHGEPYQILSTRAQLPIKERIRTIFGNSIATDILEVDLDTN
IEKEYGTDNSKYGLISVTGAITNSNYNNKKRIPPVFFINNRLVACEPLKRAVSGVYQFFL
PKGSYPFIYLSLQIDAQNVDVNIHPTKREVRFLHEEEIIELIVDKVHLILSSVDTSRKFK
TQTILSNTGTAKRPIDEFSALSTQSQKKYRQENKLVRVDRQQTKLSAFIAGQSETSYKES
ILKETKRKEDKSNEQIVEELEESDKEVDEAEDTETTNTSDIDTKVTTNSRRRVRVSLDSI
IELRKQVNEEVHRPLTDILNNAVYVGIVDEEKRLCCFQYDVKLYLCDYASLLHEFYYQVA
LYEFCNYGEILLSESIPLEDILSPLYAEEREKTLIDKDTIIDTIWAMRNMFAEYFRIGFV
ENSKGTKCLQSLPMLVKDVKPAYPKLPYFIYRLGNRINYNDEKECLGGIMRQISLLYVPE
PIFSGSSDPPSDPSSDPSKADTESSSSSEARQWLDHTLEDVLFPQIKTRFLAPSQLMKDV
VQIADLPGLYRVFERC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcaacgtctctcagagtctgtgatcaataggatcgcagctggggaaatcatc
atccaaccagtcaacgctttgaaggaaatgctagaaaactccattgacgccggagcttct
tctatagatattgttgtcaaagacggcggcaccaaattgctccaaatcgctgacaacggc
catggtattgccaaagaagacctaccgttgctctgcgaacgtttcgcaacttcgaagttg
tccaggtttgaggacctagaatcgatccagacgtacggatttcgtggggaggcacttgct
tccatttcccatattgctcggttatctgttgtgacgaaaacagccacttctgctgtcgca
tacaaagcgttttatgcgaatggcaaactttcaggacagaacttcaagtcttctgccaac
acagagcccaagcccgttgccggtaaggtcggaacccaaatcacagtagaagaccttttc
tataatctcccacaacgtcttaagggtctcaagtcgaaaagtgacgaattttcacgcatt
ctagacgtaattggcagatacgctatccattgcaaggatgtaggttttagttgtaagaaa
cacggagaaccttaccaaattcttctgacgcgtgcccagttacctatcaaagaaagaata
cgaacgatatttggcaattcaatcgctactgacatcttggaagtagatttggatacgaat
attgaaaaggaatatggcacagacaatctgaagtacggcttgatttcagtcacgggtgca
attacaaactccaactacaacaataagaaacggattccaccagttttcttcatcaataat
agacttgtggcgtgtgaaccgttgaaacgagcagtttctggagtatatcaattcttctta
cccaaaggctcgtacccgtttatctacttgagtttgcaaattgatgcccagaatgtcgat
gtaaatattcaccctacgaagcgagaggtgaggtttttacatgaagaggagatcatagag
ttgattgtagataaggtccatttgatactttctagcgtagacacctcacgaaagttcaag
acccagaccattctttctaataccggcacagccaaaagacccattgatgagttttcggct
ctatcaacacaatcacagaagaaatatcgacaggagaataaactcgtgcgagtggatagg
cagcaaaccaagctatcggcgttcattgcagggcagtcggagacaagttacaaagagagt
attctcaaagaaacaaagagaaaagaagacaaatccaacgagcagatagtggaagaattg
gaagaactggataaagaagttgatgaagcagaagatacagagaccacaaatacgtcagac
atcgacacaaaggtcaccaccaactccagaagaagagtgagggtctctttggatagtatt
attgaattgaggaaacaagttaatgaggaagtccacagaccactcaccgacatattgaat
aatgccgtttatgttggcatagtagacgaagagaaacggttatgttgtttccaatacgac
gtcaaattgtatctctgcgactacgcttcacttcttcatgagttctactatcaagtggca
ctttatgaattctgcaactacggagaaatccttctatctgagagcataccgttggaggac
attctttcaccactctatgcagaagaaagagagaagacacttatagacaaagataccatc
atcgacaccatatgggccatgaggaatatgtttgccgaatacttcagaattggatttgta
gagaactccaagggaacaaagtgtttacaatcattgccaatgttggttaaagacgtcaaa
cctgcataccctaagttaccgtactttatctacagattggggaaccgcattaactacaat
gatgagaaggagtgtcttggaggcatcatgagacagatttcacttctttacgtgcctgag
cctatttttagtggttctagtgatccacctagtgatccatctagtgatccatctaaagca
gatacagagtctagttctagcagcgaggctcgacaatggctcgaccacactttggaagac
gttttgtttccgcagatcaagactcggtttcttgcacccagccagctaatgaaggatgtg
gtccagattgccgatcttcctgggttgtaccgagtatttgaacggtgctga
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