Scheffersomyces stipitis: PICST_89181
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Entry
PICST_89181 CDS
T01023
Symbol
TUB1
Name
(RefSeq) Tubulin alpha chain
KO
K07374
tubulin alpha
Organism
pic
Scheffersomyces stipitis
Pathway
pic04145
Phagosome
pic04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PICST_89181 (TUB1)
09142 Cell motility
04814 Motor proteins
PICST_89181 (TUB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_89181 (TUB1)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_89181 (TUB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pic04812
]
PICST_89181 (TUB1)
04147 Exosome [BR:
pic04147
]
PICST_89181 (TUB1)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PICST_89181 (TUB1)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
PICST_89181 (TUB1)
Cytoskeleton proteins [BR:
pic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
PICST_89181 (TUB1)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PICST_89181 (TUB1)
Exosomal proteins of other body fluids (saliva and urine)
PICST_89181 (TUB1)
Exosomal proteins of colorectal cancer cells
PICST_89181 (TUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
4839025
NCBI-ProteinID:
XP_001384126
JGI:
89181
UniProt:
A3LTP2
LinkDB
All DBs
Position
4:905985..908041
Genome browser
AA seq
448 aa
AA seq
DB search
MREVISINVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSG
KYVPRALYVDLEPNVIDEVRTGKYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDVL
ERVRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVST
SVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCRRNLDISRPNFDSLNSLIAQVVSSVT
ASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVFSKQRANHESNSVAEITASCFEPG
NQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQAKAKKTVQLVDWCPTGFKIGICYQP
PTAITGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFT
EAREDLAALERDYIEVGTDSFPEEEEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagtcatcagtatcaatgtcggtcaagccggttgccagattggtaacgcatgc
tgggaattatactcccaggaacacggaatcagacctgatggttacttacaagaaggttta
gacagacctaaagggggcgaggaaggcttttcaacctttttctctgaaaccggctccgga
aagtacgttcctcgtgctttatacgtagacttggaacccaacgtcattgacgaagtccgt
accggtaagtacaaggacttgttccatcctgagcagttgattgctggtaaagaagatgcc
gccaacaactacgctagaggtcactacactgtaggcagagagatcttggacgacgttttg
gaaagagtcagaaagatggctgatcaatgcgatggtttgcaaggtttcctctttacccat
tctttgggtggtggtaccggttccggtttaggttcgttattgttggagcaattgtcgatc
gactacggcaagaagtccaagttagagtttgctgtctatccagctccccaagtgtccacc
tctgtagttgaaccatacaacaccgttttgacaacccataccaccttggaacacgccgat
tgtacgtttatggttgacaacgaagccatttacgacatgtgcagacgtaatttggacatt
tccagacccaactttgactcattaaacagcttgattgcccaagttgtttcttctgtcacc
gcctccttgagatttgacggttccttaaacgtggacttgaacgagttccagactaacttg
gttccataccctagaatccatttcccattggtttcgtacgctcctgttttctccaagcaa
agagctaaccacgaatccaactctgtagctgagatcactgcttcttgtttcgagccaggt
aaccagatggttaagtgtgatcctagaaccggaaagtacatggctacttgtttgttgtac
cgtggagatgtagtcaccagagacgttcaaaacgccgtagctcaagccaaggccaagaag
actgttcaattggttgactggtgtcctaccggcttcaagattggtatttgctaccagcca
cctacagccatcactggctccgaattggcctctgccagcagagctgtttgtatgttgtct
aacactactgccattgctgaagcctggagaagaatcgaccgtaagttcgacttgatgtac
tccaagagagctttcgtccactggtatgttggtgaaggtatggaagaaggtgaattcact
gaagccagagaagacttggctgctttggaaagagactacatcgaagttggaaccgactcg
ttcccagaagaagaagaagaatactaa
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