Scheffersomyces stipitis: PICST_90190
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Entry
PICST_90190 CDS
T01023
Name
(RefSeq) mitochondrial groEL-type heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PICST_90190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_90190
03110 Chaperones and folding catalysts [BR:
pic03110
]
PICST_90190
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_90190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_90190
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PICST_90190
Messenger RNA biogenesis [BR:
pic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PICST_90190
Chaperones and folding catalysts [BR:
pic03110
]
Heat shock proteins
HSP60 / Chaperonin
PICST_90190
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PICST_90190
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PICST_90190
Exosomal proteins of other body fluids (saliva and urine)
PICST_90190
Exosomal proteins of breast cancer cells
PICST_90190
Exosomal proteins of colorectal cancer cells
PICST_90190
Exosomal proteins of bladder cancer cells
PICST_90190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
4839830
NCBI-ProteinID:
XP_001385888
JGI:
90190
UniProt:
A3LXU1
LinkDB
All DBs
Position
6:complement(1023276..1025332)
Genome browser
AA seq
569 aa
AA seq
DB search
MLRASRPTVRNATVSFVRHLSHKELKFGVEGRAALLKGVNTLADAVSVTLGPKGRNVLIE
QQFGAPKITKDGVTVARSITLQDKFEDMGAKLLQEVASKTNESAGDGTTSATILGRSIFT
ESVKNVAAGCNPMDLRRGSQAAVEAVVNFLQQNKKEITTSEEIAQVATISANGDEHIGNL
LASAMEKVGKEGVITVKEGKTLEDELEVTEGMRFDRGFISPYFITNTKSGKVEFENPLIL
LSEKKISSIQDILPSLELSNQTRRPLLILAEDVDGEALAACILNKLRGQVQVCAVKAPGF
GDNRKNTLGDIAILTGGTVFTEELDIKPENATVDLLGSAGSITVTKEDTVVLNGEGSKDN
IAARCEQIRVSVEDALTTEYEKEKLQERLAKLSGGVAVIKVGGSSEVEVGEKKDRYDDAL
NATRAAVQEGILPGGGTALIKASRILDEVKANSANFDQKLGVEAIKAAITKPAKRIIENA
GEESAVIVGKIYDDLSFNNGYDSAKGEFTDMIAAGIIDPFKVVKNGLVDASGVASLLATT
ECAIVDAPEPKGAPAAPPAGGMGGMPGMF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagccagtcgtccaaccgtgagaaacgctaccgtttcgtttgttcgtcatttg
tcgcataaggaattgaagttcggagttgaaggaagagctgccttgttgaagggtgtcaac
actttggccgatgccgtttccgtgactttaggaccaaagggtcgtaatgttttgattgaa
caacagtttggtgctcctaagatcaccaaggatggtgtcactgtggccagatcaattacc
ttgcaagacaagtttgaagatatgggagccaagttgttgcaagaagtcgcttccaagacc
aacgaaagcgccggtgacggtaccacttctgctaccatcttgggtagatctatctttacc
gaatccgttaagaacgttgccgctggctgtaacccaatggacttgagaagaggatctcag
gccgctgtggaggctgtggttaacttcttgcaacagaacaagaaggaaatcaccacttct
gaggaaatcgctcaggttgccaccatttctgctaatggtgatgaacatatcggtaacttg
ttggcttcggctatggaaaaggttggtaaggaaggtgtcatcaccgtcaaggaaggtaag
actttggaagacgagttggaagtcaccgaaggtatgagattcgaccgtggtttcatttct
ccttacttcatcaccaacaccaagtccggcaaagtcgaattcgaaaaccctttgatcttg
ttgtcggaaaagaagatctcttccatccaagacatcttgccatctttggaattgtccaac
caaaccagaagacccttgttaattctcgctgaagacgtcgatggtgaggccttggctgct
tgtatcttgaacaagttgagaggacaagttcaggtctgtgccgtcaaggctcctggcttt
ggtgacaacagaaagaacactttaggtgacattgcaatcctcactggtggtactgttttc
actgaagaattggacatcaaaccagaaaacgccaccgtcgacttgttgggttctgctggt
tctattactgtcaccaaggaagacaccgttgtcttaaacggtgaaggttcaaaggacaac
attgccgctagatgtgaacagatcagagtctctgtggaagatgctcttaccaccgaatac
gaaaaggaaaagttgcaagaaagattggccaagttgtctggcggtgttgctgtcatcaag
gtcgggggttcttctgaagtcgaagtaggtgaaaagaaggaccgttatgacgatgccttg
aacgctaccagagctgctgttcaggaaggtatcttgccaggtggaggtaccgccttgatc
aaggcttcgagaatcttggacgaagtcaaggctaattctgctaactttgaccaaaagttg
ggtgttgaagctatcaaggctgccatcactaagccagccaagagaatcatcgaaaacgct
ggtgaagaatcggctgttatcgtcggtaagatctatgacgacttatccttcaacaacggt
tacgattccgctaagggcgagttcactgacatgattgctgctggtatcattgatccattc
aaggttgtcaagaacggtttggttgacgccagcggtgttgcttctttgttggccactacc
gaatgtgctattgtcgatgctccagaaccaaagggtgctccagccgctccaccagccggt
ggtatgggtggtatgccaggtatgttctaa
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