Scheffersomyces stipitis: PICST_90641
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Entry
PICST_90641 CDS
T01023
Symbol
CHD1
Name
(RefSeq) transcriptional regulator
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_90641 (CHD1)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_90641 (CHD1)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PICST_90641 (CHD1)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PICST_90641 (CHD1)
SLIK complex
PICST_90641 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
Cdh1_DBD_1
Helicase_C
HTH_Hrp3
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
4840385
NCBI-ProteinID:
XP_001385507
JGI:
90641
UniProt:
A3LXK9
LinkDB
All DBs
Position
6:772013..776677
Genome browser
AA seq
1414 aa
AA seq
DB search
MVKPVLQEATLFPELYGLRRSHRERRAAIVESESEEEPIPKRRKKKAQRTEDYGDENEED
EEDDAEDSEDEDFYDKPLAKKKKKTIIQKKKKKSSVKSEPSVPAEIRFSSRNNKQVNYAV
DYDDDDDLLESEPELDENDEDVNGDYYYYQQANEDENERGIDLVMDHKLNEENPEKTGDP
KLDYLFRIKWTDQSHLHNTWEQWNDLKEYKGIRKVENYIKQFIIYDQEIRNDPLTTREDI
EAMDIDRERKRDEQEEYTRVERIVDSERIETENGETKLQYYCKWRRLYYDECSWEDAEEI
AKIAPDQVAKYQQRLKSKILPNLSANYPLSQRPRFEKLVKQPVFIKNGELRDFQLTGLNW
MAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYSRRQNGPHIVVVPLSTIPAWQETFEK
WSPDVNCVYYLGNTQARKTIRDYEFYGSNNKPKFNILLTTYEYILKDRNELGAFKWQFLA
VDEAHRLKNADSSLYESLKSFKVANRLLITGTPLQNNIKELAALVNFLMPGKFDIEQEID
FETPDEEQELYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELSDIQTEYYKNIIT
KNYSALNAGNKGAQISLLNVMSELKKASNHPYLFDGAENRVLAKVGSATRDNILRGMIMS
SGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGGIPSAQRRIS
IDHFNAPESKDFIFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNH
VSVYRFVSKDTVEEQILERARKKMILEYAIISLGITDPNSKKSKTEPSTGELSQILKFGA
GNMFKENDNQKKLEDLNLDDVLNHAEDHVTTPDLGESNLGSEEFLKQFEVTDYKADVEWD
DIIPQEELAKLKDEEKKKADEIYLEEQIAMYSRRKAAVRKFENGSVAPSDDEDEDSSSGR
QPRSKHAGDHQLSEKEIRGIYRSILRLGDLTGRWEQLVEEGSVTNKNPVLVKHAYNEIIN
TSKQLVKEEEIRRTKALADLERKAIEQREKGAVENPTALWIAKKKEKKAVLFEYQGVKNI
NAELVLNRPVDMKMLDSMIPKENPTSFELPRPPKSVSAWSCDWSEKDDAMLLVGVFKFGY
GSWVQIRDDTVLGLQTKLFLEGSTNPKEANTVSTAPAGEAGSGAPVEEKAVKKVPGSVHL
GRRVDYLFSLLRGDDDRANGGSTPSGVTIKKKVRRPKTETPVPAGKAKAAARSQSPETNL
KKSKVRSIAPKASPSSPAGNSPKVDSGAHTHSSQHQPHHNNNSKDDDKDLEYDSMDEGYC
KDVLKPVAKSLMRLHKGNQGFEKHEWANILKTELLTVGDFIGTVVKPLDGKPEGNKLQKH
LWSYSRLYWPAKVPSKKIFDMYTRLKTKSGQNTK
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaccggtattacaagaggcaaccctctttccggaactctacggactcagacgg
tcccacagagaaagacgtgctgccatcgtcgaaagtgaaagtgaagaagaacctattcca
aagagaaggaagaagaaagctcaacgaactgaagattacggtgatgaaaacgaagaagat
gaagaagacgacgcggaagactctgaggacgaagatttttacgacaagcctcttgcgaag
aagaagaagaagacaattatacagaagaagaagaagaaatcatctgtgaaactggaacct
tcggttcctgctgagatcagattctcgtcgagaaataacaaacaggttaactatgccgtt
gattatgatgacgacgacgacttgcttgaaagtgaaccagaacttgacgaaaacgacgaa
gacgtaaatggagattactactactatcaacaagccaatgaagatgaaaacgaaagaggt
atcgatctcgtcatggatcacaaactaaacgaagaaaatccggaaaagactggtgacccg
aagctagactacttgttcagaattaagtggacagaccaatcgcatttgcataatacttgg
gagcagtggaatgacttgaaggagtacaaaggtatcagaaaagtcgaaaactacatcaag
caattcataatatatgatcaagagatcagaaacgatcctttgacgactagggaagacata
gaagccatggacattgaccgcgaaagaaaacgcgatgaacaagaagaatacactcgtgtt
gaaagaatcgttgactccgaaagaattgaaaccgaaaatggcgaaactaagttacaatac
tattgtaagtggagaagactctactatgacgaatgttcttgggaagatgctgaagaaatt
gctaagattgctcccgatcaagtagccaagtatcagcaaaggttgaagtctaagatattg
ccaaacttgtcagctaattacccattgtcacaaagacctagatttgaaaagttggttaaa
cagcctgtttttatcaagaatggagagttgagagatttccagttgaccggtttgaactgg
atggctttcttgtggtctagaaacgaaaacggtattcttgctgatgaaatggggttgggt
aagactgtgcaaactgtttcatttctctcttggttgatttattctagaaggcagaatggc
cctcatattgttgttgtgccattgtcaacaattccagcttggcaagagacctttgagaag
tggtctcctgatgtaaactgtgtttattacttaggtaatactcaggcacgaaagaccatc
agagactacgaattctacggatccaacaataagcctaaattcaacatattgttaactaca
tatgaatacattttgaaggaccgcaacgaattgggtgctttcaaatggcaattcttggct
gttgatgaagctcatagattgaagaatgctgactcctcgttatatgaatcgttgaagagt
tttaaggttgccaacagattgttgattactgggacacctttgcaaaacaatattaaggaa
ttggccgctttggttaacttcttgatgcctggcaaattcgatattgagcaagaaatcgat
tttgaaactcctgatgaagagcaggaattgtacattaaagacttacagaaaaagatccag
cctttcatattgagaagattgaaaaaggacgtggagaaatcccttccttccaagacagaa
agaatcttgagagtagaattatcagatatccagactgagtactacaagaacattatcact
aaaaactattctgctttgaatgctggaaataagggcgctcagatctcgttgttgaacgtg
atgagtgagttgaagaaggcgtctaaccatccttaccttttcgatggtgctgagaacaga
gttttagccaaggttggttctgctactagggataacatcttgagaggtatgattatgtct
tctggtaagatggttttgcttgaacaattattaaccagattgaaaaaggaaggtcacaga
gtcttaatcttctctcaaatggtcagaattttggatattcttggcgattatttatcgatc
aagggttaccagttccaaagattggatggtgggataccgtctgctcaaagaagaatctct
attgaccatttcaacgctccagaatcaaaggatttcatctttttgttgtccactagagct
ggtgggttaggaattaatttaatgaccgctgacactgttatcatatttgactctgattgg
aaccctcaagctgatttgcaggcaatggccagagctcatagaattggtcagaagaatcat
gtgtcggtttacagattcgttagtaaagatactgttgaggagcagatcttggaaagggct
aggaaaaagatgattttggagtacgccattatttcgttgggaatcacagatcccaactcg
aagaagagcaagaccgaaccatcaacaggtgaattgagtcaaatcttgaagtttggtgct
ggcaatatgttcaaagaaaacgataaccaaaagaagttggaagatttgaacttggatgat
gtattaaatcatgctgaagatcatgtcactactcctgaccttggagagtccaacttgggt
tctgaagaatttttaaaacagttcgaagttacagattacaaggccgatgttgaatgggac
gatatcatccctcaagaagaattggccaagttgaaggacgaggagaaaaagaaggcggat
gagatctacttggaagaacaaattgctatgtactcgagaagaaaagctgccgttcgtaaa
tttgaaaatggatcggttgctccaagtgatgacgaagatgaagattcttctctgggtaga
caaccaagactgaagcatgccggcgaccatcaactttctgaaaaggaaattagaggtata
tacagatcaatcttgagacttggtgatttgactggaaggtgggagcaattggttgaagaa
ggaagtgtcacaaacaagaatcccgttttggtcaaacatgcctacaatgagattatcaac
acttccaaacaattagtaaaggaagaagaaatcagaagaactaaagccttggccgatttg
gaaagaaaggctattgagcaaagagaaaagggagctgtagaaaatccaacggccttgtgg
attgccaagaagaaggaaaagaaggccgtcttattcgaataccagggggtcaagaatatt
aatgctgagttggtattgaatagacctgtggacatgaagatgcttgacagtatgattcct
aaggaaaaccctacttcatttgaattgcccagacctcctaagctggtgtcagcctggtct
tgcgattggtctgaaaaggacgatgccatgttgttggttggtgttttcaaattcggatat
ggatcttgggttcagattcgtgacgacactgttttgggattgcagacaaagctcttctta
gaaggctctacgaatcctaaggaagcaaatacagtgagtactgctcctgctggtgaagct
ggctctggtgctccagttgaagaaaaggcagttaaaaaggtgccaggctctgtgcatttg
ggtagaagagtagattacttgttctcgttactcagaggtgacgatgaccgtgcaaatgga
ggctccactccttctggtgttactattaagaagaaagtgagaagaccaaagacggaaacg
ccggttccagcaggtaaagctaaagccgcagctaggtcacaatctcccgaaactaacctc
aagaagtctaaggtgagaagcattgctccaaaggcgtccccatctagtcccgctggtaac
tctccaaaggtagattctggagctcacacacactctagtcagcaccagccacatcacaac
aacaattccaaggatgatgataaagatcttgaatacgatagcatggatgaagggtactgc
aaggacgtattgaagcccgttgcaaagtcgttgatgagactccacaaaggaaatcaagga
tttgaaaaacacgaatgggccaacatcttgaaaacggaattgctcaccgtgggcgacttt
attggcacagttgtcaagccgttggacggtaaaccagaaggaaataagttgcagaagcat
ttatggtcgtattctagactctactggccagctaaagttccttcgaaaaagatcttcgac
atgtacactagactaaagaccaaatctggccaaaacactaagtaa
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