Scheffersomyces stipitis: PICST_90954
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Entry
PICST_90954 CDS
T01023
Name
(RefSeq) predicted protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
PICST_90954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_90954
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PICST_90954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
T5orf172
FANCL_C
DUF3137
Motif
Other DBs
NCBI-GeneID:
4840669
NCBI-ProteinID:
XP_001386362
JGI:
90954
UniProt:
A3LZG5
LinkDB
All DBs
Position
7:complement(898914..900156)
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AA seq
336 aa
AA seq
DB search
MPRRPSTGTQSDTPALHVVPSFYGVYLLQSEPKPSSFYIGSTPDPPRRLRQHNGDLKAGG
AYRTKRAGFRPWRMLLVVYDFPSKVSALQFEHSFQHCHETRHIKQEERISKNKLSGRTLH
HKVANVALLLRSSYFRHLPLKVLVFEEAVYNSFMNNKFVTCSHVDLLNTNFNEYFSVMEK
DLDSTVDSWKTRHTNENEIWSMAKEAVILGSPRCALCLEPIEQVPETSSPISKRSDLQRY
LQSESLPLVTMCYNPQCRDVFHLSCLGHRFTNSDGFQSLIPATVNRCCSCNAKLEWRTLA
KIATKLRYYVLKDSLQLPSQVLENDDNYESQNVNDS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaagaccctctacaggtacacagtcggatactcctgctctccatgtagttccc
agcttttatggagtctatcttcttcagctggaacccaagccaagctcgttctatatcgga
tcaaccccagatcctccgcgtaggttgagacaacataatggagatctcaaagctggtggg
gcgtaccgcaccaagcgggcaggattcagaccctggaggatgttgctcgttgtgtacgat
ttcccgtccaaagtgtctgctctccaattcgaacattcttttcaacattgccatgagaca
agacatatcaaacaagaagaaagaatatcaaagaacaagttgtcaggtagaacgctacat
cacaaggttgccaacgtagcattgttgctacgctctagctactttcgccatttgccccta
aaggtcttagtgtttgaagaggctgtttacaatctgtttatgaacaataagtttgtaacc
tgtagccatgtagacttattgaataccaatttcaacgaatacttttcagtgatggaaaaa
gatcttgactctactgtagattcttggaaaacgaggcatacaaacgagaatgagatatgg
agcatggcaaaggaggcggtgatccttgggtctcctcgatgtgcattgtgtttggagcca
attgaacaagtacccgaaactctgctgccaataagcaaaaggtcagatcttcagagatac
ttacaaagtgaaagtcttcctcttgtgaccatgtgctataatcctcaatgtagagacgtt
tttcatttgtcatgccttggccacagattcactaatagtgatggcttccaaagcctcatc
cctgcaactgtaaataggtgctgtctgtgtaatgcaaagttagaatggagaacgttggcc
aagattgctacgaagttacgatattacgtcctaaaagattcccttcaactaccaagtcaa
gtcttggaaaacgacgacaactacgaatctcaaaatgtgaatgattcttaa
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