Scheffersomyces stipitis: PICST_91563
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Entry
PICST_91563 CDS
T01023
Symbol
POL5.3
Name
(RefSeq) RNA-directed DNA polymerase Tps5.3 polyprotein
Organism
pic
Scheffersomyces stipitis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
rve
gag_pre-integrs
rve_3
Motif
Other DBs
NCBI-GeneID:
4841102
NCBI-ProteinID:
XP_001386649
JGI:
33715
UniProt:
A3LZY6
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Position
8:complement(287236..290536)
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AA seq
1040 aa
AA seq
DB search
MAKNCPAPYREGEVPRMASRFGPGGPGKHRRKHGSRPKPAAHYALADDASTFGFDQPGAY
YAHLAHYTHYALLASSSSASFIFDSGASTHICNDRSLFHDIVPHSGSVMNAGHEPLSIAG
RGTLVFDLHGQKIRVFNVLHVPDCTQNLLSISAVTTTGDKLVISHDDIVHPKYGQLATRD
SRNLYLSCLEIVRPSTVSRANHSAYSAPAPVTVATPAADPGVAPISASALVHARLGHPSP
TVVRSALKYPNMPRTAVHDSISCEACLRSKSTRVIPKTTTGPVTSAPLQLLHCDLSGPHA
GGPSSLFYFCILLDDFTRFKAVGPILKKSDAADFIIKVIKAWTNHFSSRGGYRVCNFRSD
NGGEFVNSTLTSFFAAEGIQTQLTVPGNSHQNGRAERAIRSVLDKTRTMITASSLPSPLY
PHALQHAAFLLNRLPTPVLQNRSPFELWHGARPILSQLKVFGCAAFVNVPPNHRQSKLVA
RAIKGVYLGSDPFRKAHLVYDLATRQVITSSHVRFQENVFPFARPSTSTVVSATSIGGGG
SGGGSFPSISAPAPGLTQGPHVSSAPSPSPPSTPSGSTVAQSPGSSAASSSASAPVSPAA
STTHSSQPPSTPTPVPSPISVPSPISVPSPTPAPASAPVSSSAPVPSTSAVQTAPSRAVV
PVQRSDSPPYDPYESSDDSYTAPASREVPSIPAPRKVPSLPAPRQVPSLPSTRKVPSLPS
TRTVPSLPAPRTVPLLTTAPLGLPHPAVEAPPTIPGSSSAIPMEIVSTDTEPEPMSEDGN
DMEEEYPDPSTYMDIVVMDSDDLSSYHDSEMEDASDMDPLPLIRPTSNMEMEDTSTTYSS
PLTRHTPTTQTVVSSTPPPPPQPSPRVVQSDSPQSSPIIEVPDSPPLQSRPPQFLLPPGL
SPTRLIELPASGGMELILSSTDRALVPSNSEANNELTHLVVSRPPPVNGVKHKLTPVPSR
DGTHPQTLKRAHRPILAPTRSQRQQDNQNLISYPQRQQIEYITTDSESFSEADNPNDPDY
TETHGQPLIMVLNENDGLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaactgccctgctccctatcgtgagggtgaagttcctcgtatggcttctcgt
ttcggtcctggcggtccaggaaagcaccgcaggaagcacggctctcgtccaaagcctgct
gctcattatgctctcgctgatgatgctctgacctttggttttgaccagcccggtgcttac
tatgcccatctcgcccactacacccactatgctctcttggcttcttcttcctctgccagc
tttatttttgattcaggtgcttctacccacatttgtaacgacagaagtctcttccatgac
atcgttcctcactctggttctgtcatgaacgccggtcacgagcctctctcgattgccggt
cgtggtactcttgtgtttgatctccatggtcagaagattcgtgtctttaacgttcttcac
gttcctgactgtactcagaatcttctttccatcctggctgttactactacgggcgacaag
cttgttatctctcatgatgacattgttcaccctaagtatggccaacttgctaccagagac
ctgagaaatctttacttgctgtgtctcgaaattgtccgcccctcgactgtctcgcgggct
aaccactctgcctactcggcccccgctcctgttacggtcgctactcctgctgcggaccct
ggtgtggcacctatttctgcctctgctcttgtccatgctcgccttggccacccttctccg
actgtcgttcgtctggccttgaaatatccgaacatgcctcgaacggctgttcacgactcg
atttcatgtgaagcatgtcttcgctccaagagcactcgggttattcccaaaacgaccacc
ggtccagtcacatctgctcccttgcaacttcttcactgtgatttgtccggtcctcatgcc
ggtggtccctcctcgttgttttatttttgtattcttcttgacgactttactcgcttcaag
gctgttggccctatcctcaagaaatcggatgctgcggacttcattatcaaagttattaag
gcatggacaaaccacttctccagtcgtggtggctaccgtgtctgtaactttcgttctgac
aatggaggtgagtttgtcaatctgacgcttacttcattctttgcggcagaaggtatccag
acccagctcactgtgcctggtaactcacatcaaaatggacgtgctgaaagagcgattcgc
tccgttcttgacaaaacgcgtaccatgattactgcgagctctcttccttcgcccctctac
ccgcatgcactccaacatgctgcatttctcctaaaccggctaccaacacctgttctccaa
aatcgctcgccatttgaactctggcatggcgcgaggcctatcttatctcaacttaaagtg
tttgggtgtgctgcctttgtgaatgttccacccaatcaccgtcaactgaagttggtcgct
cgtgcaatcaagggtgtttatcttggatctgatccgtttcggaaagctcatcttgtttat
gatctcgctaccagacaagtgattacctcttctcatgttcggttccaggaaaatgtcttt
ccttttgcaagacctctgacgtcaactgtcgtgtcggctacctccattggtggtggtggt
agtggtggtggaagttttccttctattctggcacccgctccaggcctcactcagggtcct
catgtatctctggccccatctccctcacctccatccacgccatctggcagtactgttgct
caatcgccaggttcatctgcagctctgtcgtctgcttcggcaccggtctctcctgctgca
tctactactcatctgtcgcagcctccgtcgactcctacaccggtgccttctcctattctg
gtgccttctcctattctggtaccttctcctactccggcgcctgcttctgctccggtatct
tcttctgctccggtaccctctacttcggcggtccaaactgctccttcccgtgcagttgtt
ccggttcagaggtccgatctgcctccctatgatccctacgagctgtctgacgactcctac
acagctcctgcttctcgtgaggtaccatccattcctgctcctcgtaaggtaccatccctt
cctgctcctcgtcaggtaccatcccttccttcaactcgtaaggtgccatctcttccttct
actcgtacggtaccttcacttccagcacctcgtacagtacccttacttactactgctcct
ctcggtcttcctcatcctgcggttgaggctccacccactatccctggatcttcatcagcc
atacccatggaaatagtttctacggatactgagcctgagcctatgtctgaagatggcaat
gacatggaagaagaatatccagatccgtccacctatatggacatcgtggtgatggattcg
gatgatctttcttcttatcacgactcggaaatggaggatgcctccgacatggatcccctt
ccgcttattcgtcctacttctaatatggaaatggaggacacctccaccacttattctctg
ccgcttactcgtcatactcctactacgcagactgtggtgtcctctacacctccacctcct
cctcaaccactgcctcgggtggttcaatccgactctcctcaatcgtctcctattattgag
gttcctgattctcccccacttcaatctcgtcctccgcaattcctcctccctccgggtctt
tctcctactcgtctcattgagttgcctgcttcaggggggatggaactcatcctatcgctg
actgaccgtgccttggtccctctgaattctgaggccaacaacgaactaactcatcttgtt
gtatcgcgtcctcctccggtgaatggggttaagcataaactcaccccggttccgtcgcgt
gatggaacacatccacaaacactcaagagggcgcacagaccaatacttgctccaacacgg
tcacagagacaacaggacaatcaaaatttgatcagctatccgcagagacaacaaattgag
tatattaccaccgatagtgaatcattttcagaagcagacaatcccaacgatcccgactac
acagaaacacacggccaacctcttattatggtcctcaacgagaacgatggattgaagcta
tga
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