Pseudomonas iranensis: HU724_000350
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Entry
HU724_000350 CDS
T07894
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pie
Pseudomonas iranensis
Pathway
pie02025
Biofilm formation - Pseudomonas aeruginosa
pie03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU724_000350 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU724_000350 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pie02044
]
HU724_000350 (tssM)
Secretion system [BR:
pie02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU724_000350 (tssM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXI22762
LinkDB
All DBs
Position
complement(70924..74463)
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESATSRLLTISVLFL
IWGLTMVFVSWRAGIRKKAEEESEDGQDRIRREELIDEEQKELKARFKDALKTLKTSSLY
RGRSERWRSDLPWYLLIGPQASGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD
HGVLIDTAGRYTTQPDAEVDGNAWTTLLELLRKRRRGRPLNGVLVTIPVETLTGGSEQDI
ETLARQVRSRLQDVHQKLHVDVPVYLVLSKADKLLGFDEFFDQLTREESDQVLGTSFRKD
QVGTDVTVLRNEFEELLRRLNSQVIMRMHSERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRATQLRGFYLTSAPHLTQEMDSTTAGIGASLGMNAGVLPTLRSGRSRFIHHL
LSQVIFPEADLAGLDKRERSRIHWGQRALYVGALAALALFGMLWAGGFSANYERLENLRT
LAQNWTQQRSAVTPRDDAMGVLKVLDTSYAATQVFPSKGDVSYHERGGLYQGEEINPVVK
TAYERELEAQLLPRVATMLEGQIRANMKDRDRLLNSLRAYLMLNMKDRRDAAWLKDWVAT
DWSQRYTGNTAVQNGLNTHLERLLKQPFIYPLNDQLVTQARQVLRSESLANVVYRMLREQ
ARNLPDYRFSQHLGPQGSLFIGTEYVIPGFYTQQGYQQYFSVQGAALVTDILRDNWVLGE
GAGISDMDLRRLMVELEQLYFRDYANYWSEAVGQVALPPISDAGEGAEQLAGLTSANSPV
LALLTEVRENTRFEAAADPVDEAGEAADALAGQKGKLGKVGKLAAAAADKASALNVAKNL
PDTAKKSLQRRFEPLHRLLDDNNGPGADLTPAFSALNDLQLQLAGLARSSTPEQAAFEMA
KTRMSGQRDALTNLRNASGRLPRPLSVWFNVLAEDSWRLVLNDAYQYLNGRYQNELYSVY
GKTISKRYPFSASSTSDVAISDFREFFRAQGTVDRFFDSYMRPFVSGDPGNYRMRSVDGH
SLPVSKVYLDQMAAAQTIRQSFFSINPAEPTVQFKLEPYTLDPAVSRSEFKFGDKTMEYR
HGPILPMTFKWPTDAEDGRTSLVMDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLNGRDV
LVLKADVGGLRANYLLTSQRTPNPFDMGVLRTFRMPVQL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgccttcctgcgccagacctgggtctggactctg
ctgctggtgctgttcgtggcgctgctggtgtggttcgtcggcccgttgttggcggtcgat
gattacaagttctgggaaagcgcgacctcgcgcctgctgaccatcagcgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgcgggtatccgcaagaaagccgaa
gaagaaagcgaggacggccaggaccgtatccgccgcgaagagctgatcgacgaagaacag
aaagagttgaaggcgcggttcaaggacgccctgaaaaccctgaagacgtcgagcctgtat
cgcggtcgcagcgagcgctggcgcagtgacttgccgtggtacctgctgatcggtccgcag
gcctcgggcaaaaccagcctgctggacttctccggtctggaatttccgatcaacaagatc
gaccgcaagctgacccgcgacaccctcggcacccgtcattgcgactggtatttcgccgat
cacggtgtactgatcgacaccgccgggcgctacaccactcaaccggacgcggaagtcgac
ggcaacgcctggacaaccctgctggagctgctgcgcaagcgtcgtcgcggccgtccgttg
aacggcgtgctggtgaccattccggtggaaaccctcaccggcggcagcgagcaggacatc
gagaccctcgcgcgccaggtgcgcagccgtttgcaggacgtgcatcagaaactgcacgtc
gatgtgccggtgtatctggtcctgagcaaggcggacaagctgctcggcttcgacgaattc
ttcgatcagctgacccgcgaagaaagtgatcaggtgctcggcaccagtttccgcaaggat
caggtcggcaccgacgtcacggtcctgcgcaacgagttcgaagagctgctgcgccgcctg
aacagccaagtgatcatgcgcatgcactccgagcgcgacactcagcgccgtggccgcatc
ctcgacttcccgcatcagttggggcagatcggcgagcgtctgtgcctgttcgtcgacatg
gcgttcaccggcaaccgttatcagcgcgccacgcaactgcgcggtttctacctgaccagc
gcgccacacctgacccaggaaatggactcgactaccgccggcatcggcgccagcctgggc
atgaacgccggtgtgctgccgaccctgcgcagcggccgttcgcggttcatccaccacttg
ctcagccaagtgattttccccgaggccgatctggccggtctggacaagcgcgagcgcagc
cgcattcattggggccagcgcgcgctgtacgtcggcgcactggcagcactggcactgttc
ggcatgctctgggccggtggcttttcggccaactacgagcgtctggaaaacctgcgcacg
ctggcgcagaactggactcagcaacgctcggccgtgacgccgcgtgatgacgccatgggc
gtgctgaaagtgctcgacaccagctacgcagcgactcaggtgttcccgagcaagggcgac
gtgtcgtaccacgaacgtggcggcctgtatcagggcgaagagatcaacccggtggtgaaa
accgcctacgagcgtgagcttgaagcgcagttgctgccacgggtggcgaccatgctcgaa
gggcagatccgcgccaacatgaaggaccgcgatcgcctgctcaacagcctgcgcgcgtac
ctgatgctgaacatgaaggatcgtcgcgacgcggcatggctcaaggactgggtcgccact
gactggtcgcagcgctacaccggcaacaccgcggtgcagaacggtctgaacactcacctc
gagcgcttgctcaagcagccgttcatttatccgctgaacgatcaactggtcacgcaggcg
cgtcaggtcctgcgcagcgaatcgttggccaacgtggtttaccgcatgctccgcgagcag
gcgcgcaacctgccggactatcgcttcagccaacacctcggcccacaaggttcgctgttc
atcggcactgaatacgtgatcccgggtttctacacccagcagggttatcagcagtatttc
tcggtgcagggcgcggcgctggtcaccgatatcctgcgtgacaactgggtgttgggcgaa
ggcgctggcatcagcgacatggacttgcgtcgcctgatggtcgaactcgagcagctgtac
ttccgcgactacgccaactactggagcgaagccgttggccaggtcgcattgccaccgatc
agcgacgccggcgaaggcgccgagcaactggcgggcctgacgtcggccaactcgccggtc
ctcgcattgctcaccgaagtacgtgaaaacacccgcttcgaagccgcggctgatccggtc
gatgaagccggcgaagctgccgatgcgctggccgggcagaaaggcaaactgggcaaggtc
ggcaaactcgccgcggctgccgccgacaaggcttcggcgctgaacgtcgcgaagaacctg
ccggacaccgcgaagaaatccctgcaacgccgcttcgaaccgctgcatcgtctgctcgat
gacaacaacggcccgggcgctgacctgacgccagcgttcagcgcgctcaacgacctgcaa
ctgcaactggccggcctggcccgttccagcacgccggagcaagccgcgttcgagatggcc
aagacgcgcatgagcggccagcgtgatgcgctgaccaacctgcgcaatgcctccggtcgt
ctgccgcgtccgctgagcgtgtggttcaacgtgctggccgaagactcgtggcgcctggtg
ctcaacgatgcctatcaatacctgaacggccgttatcagaacgagctgtacagcgtgtat
ggcaaaaccatcagcaagcgctatccgttcagcgccagcagcaccagcgacgtggcgatc
agcgacttccgtgagttcttccgtgcgcaaggtaccgtcgaccgcttcttcgacagctac
atgcgcccgttcgtcagcggcgatccgggcaactaccgcatgcgcagcgtcgacggtcac
agcctgccggtatcgaaggtctacctcgatcagatggcggcggcgcagaccattcgccag
agcttcttctcgatcaacccggccgagccgaccgtgcagttcaaactggagccgtacacc
ctcgatccggcggtcagccgttccgaattcaagttcggcgacaagaccatggagtaccgt
cacggcccgatcctgccaatgaccttcaagtggccgaccgatgctgaagacggtcgcacc
agtctggtcatggacaagatggccgggcgtccgatcggtatcgagaagaactccggccca
tggtcgctgttccgtctgttcgacctgatgcagaccgagtacctgaacggtcgtgacgtg
ctggtactgaaagccgacgtgggcggcctgcgcgccaactacctgctgaccagccagcgc
acgccgaacccgttcgacatgggcgtgctgcgcaccttccgtatgccggtgcagctctga
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