Pseudomonas iranensis: HU724_000360
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Entry
HU724_000360 CDS
T07894
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pie
Pseudomonas iranensis
Pathway
pie02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU724_000360 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pie02044
]
HU724_000360 (tssK)
Secretion system [BR:
pie02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU724_000360 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXI22764
LinkDB
All DBs
Position
complement(75359..76690)
Genome browser
AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSGESKRPRLDSRYSHADQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRQR
LPQHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataaagtcatttggcaggaaggcatgctgctgcgtccgcagcacttccag
cacaacgatcgctattacgatcaccagatgaaaacccgcacgcaattgctcggtggctac
acctggggtttcctcaatctggagatcgacttgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggattctgcccgacggcagcctgttcgaactcggtggcaacact
gagccgctggcgctggacgtgccgccgaacaccggcaacacgccgatctatctggcgctg
ccgctggtcaccggcaaccacatcgaggcccggcgcccggagcaatccgacgtgctcgcg
cgctacaccgcgtatgacgcggaagtcgccgattccaacgccggcgacgattccgccagt
caggtcagctgcggtcgcccggatttcaaactgttgctcggcgagcagcagagcgatcag
gcctatgtgaagctgaaaatctgcgacgtgctcgacaccacgcccgacggcgtgatcagc
ctcgatccggatttcgtcccgacctatattcaggcccacgcctccagctacctgctgtcg
tgcctgaaagaagtcatcagcatgctcagccaccgtggcgacaccattgccgagcggatt
cgctccaacggcaaggtcggcggcgctgaagtcggcgacttcatgatgctgcaactgatc
aaccgtaccgaactgctgctgcgccattacctcgggcttgagcaggtgcacccggaagag
ttgtaccgcacgctgctgaccatgctcggcgatctggcgaccttctccggcgagagcaaa
cgcccgcgtctggacagccgctattcccacgccgatcagggcgcaagcttccgcaaactg
atggaagcgatccgtcaggtgctgtcgatggtgctcgaacagcacgccatcgagttgatc
ctgcaggcgcgtcagtacggcatcatcgtctcgccgttgcacgaccacaaactgctcggc
tcggcctcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgtcagcgt
ttgccgcagcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcac
ttgccggggatcaaggtcaaaccgttgccggtggccccacggcagatcgcgttccactcg
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggtttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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