Pseudomonas iranensis: HU724_001275
Help
Entry
HU724_001275 CDS
T07894
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pie
Pseudomonas iranensis
Pathway
pie03030
DNA replication
pie03410
Base excision repair
pie03420
Nucleotide excision repair
pie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU724_001275 (polA)
03410 Base excision repair
HU724_001275 (polA)
03420 Nucleotide excision repair
HU724_001275 (polA)
03440 Homologous recombination
HU724_001275 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pie03032
]
HU724_001275 (polA)
03400 DNA repair and recombination proteins [BR:
pie03400
]
HU724_001275 (polA)
Enzymes [BR:
pie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU724_001275 (polA)
DNA replication proteins [BR:
pie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HU724_001275 (polA)
DNA repair and recombination proteins [BR:
pie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HU724_001275 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU724_001275 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QXI22944
LinkDB
All DBs
Position
complement(279598..282402)
Genome browser
AA seq
934 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVDGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYANLDIVPTLPIRGAKNLPAKLEEHREM
AFLSYQLATIKVDVPLDIGLDDLQMGQEDPAKLYELYTLLEFKSWLNDLDRDAKRQELSA
AAEPAPAHDLFSAPQAEAPVAPFEAAYETILDQARFDVWLEKLRNARLIAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DMNILANCAIGGDQSEGISVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQTLFDKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSRDEGLMDAFRNNLDVHTATAAEVFKVELDQVTSDQRRSAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPEINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLTTSGLDARVILQVHDELVLEVREDLVE
QVSAEIRTHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgcgcctttcat
gcactgccaccactgaccacgtccaaaggcctgccgaccggtgcggtcaaaggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagccccttcgccgtagtgttcgac
gccaagggcgggacatttcgcgatgagatgtacgccgaatacaaggccaaccggccaagc
atgcccgatgacatgcgcgtgcagatcgagccgctgcaccagagcgtgatcgccctcggc
ttcccgctcctgtgcgtcgacggcgtcgaggccgacgacgtaatcggcaccctcgcccgc
agtagcgcagcggcggatcgcccggtgatcatttccaccggtgacaaggacatggcgcaa
ctggtcgatggccacattaccttggtcaacaccatgtccggtagctcgatggatgtggag
ggcgttaaggagaaatttggcgtcgcaccggagcagatcatcgattatctggcgctgatg
ggcgattcgtccgacaacattccgggcgtgccgggcatcggcccgaagacggcgtccggc
ctgctggtcggcgtcaacggcggcctgaccgagctgtacgccaacctcgatatcgtgccg
accctgccgatccgtggcgcaaaaaacttgccggccaagctcgaagagcaccgggagatg
gctttcctgtcctatcaactggcgaccatcaaggtcgacgtgccgctggatatcggcctc
gacgatctgcaaatgggccaggaagacccggccaaactctacgagctgtacaccctgctg
gaattcaagagctggctcaatgatctggatcgcgatgccaagcgtcaggaactgagcgcg
gctgccgaacctgcgcccgcccatgatctgttcagcgccccgcaagccgaggcacctgtt
gctcctttcgaggccgcatacgaaaccatcctcgatcaggcccgcttcgacgtctggctg
gaaaaactgcgcaacgccaggctgatcgccttcgacaccgaaaccaccggcatcgacgcg
cagcaggcgcaactggttggcctgtcgttcgccgtacaggccaacgaagccgcgtacatc
ccgctgacccattcctacatcggcgtgccggagcagctggatcgcgacaccgtgctgcgc
gcactcaagccgattctggaagacccgaacaaactcaaggtcggccagcacgccaagttc
gacatgaacattctggccaactgcgccattggcggcgatcagagtgaaggcatcagcgtg
cgcggcatcgccttcgacaccatgctcgagtcctacgtgctcaactccaccgcgacccgc
catgacatggacagcctcgcgcagaaatacctcgatcacaccacggtgagcttccaggac
atcgccggcaaaggtgccaagcagctgaccttcgaccagatcgccctggaacaggccggg
ccgtacgccgccgaagacgccgacatcaccctgcgcctgcatcagaccctgttcgacaag
ctcagcgcgattccgagtctggccagcgtgctgaccgacatcgaaatcccgctggtaccg
gtgctggcgcgcatcgaacgccagggcgcgttcgtcgatgccgagttgctgggcattcag
agcatcgagctgggcaacaaaatggtcgcgctggagcgtgaagccttcgaaatcgccggg
gaagaattcaacctcggctcgccgaagcagctgggcgtgattctttatgaaaagctcggc
ctgccggtgctgaagaaaaccgccaaaggccagccgtccaccgctgaagaagtgttggcg
aaactcgccgaagacgatcaccgcttgccgaaggtgctgatggagcaccgctcgatgagc
aagctgaaaagcacttacaccgatcgcctgccggagcagatcaacccgcgcaccgggcgc
atccacacctcgtatcaccaggctgtggcttcgaccgggcgcctgtcctccagtgatccg
aacctgcagaacattccggtgcgcaccgccgaaggccgacgcattcgtcaggcgttcgtc
gcacccaaaggctacaaactgctggcggcggactattcgcagatcgaactgcggatcatg
gcccacctgtcccgtgacgaaggcttgatggacgccttccgcaacaatctcgacgtgcac
actgcaaccgctgccgaagtattcaaggtcgagcttgatcaagtgacatccgaccagcgc
cgcagcgccaaggcgatcaacttcggcctgatctacggcatgggcgcgcagaagctcggc
aaggacatcggcgtcgacaccaagaccgccaaggcttacatcgacacctacttcgcccgt
tatccaggcgtgcgcgaatacatggagcgcacccgtgcgcaggcggcggatcagggttac
gtcgaaactttcttcggccgtcgcctctacctaccggagatcaactcgaacaagccgcag
gaacgcgccgccgctgaacgcacggcgatcaacgcgccgatgcagggcacggcagcggac
atcatcaagaaagccatggtggctgtggataactggctgaccacgtcgggtctggatgcc
cgagtcatcctgcaagtgcacgacgaactggtgctggaggttcgcgaggatctggtcgag
caggtcagcgccgagattcgtacgcacatgagcgaagcggcgaaactggatgtgccgctg
ctggtggaagttggcgtgggcaacaactgggatgaggcgcactga
DBGET
integrated database retrieval system
