Pseudomonas iranensis: HU724_004805
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Entry
HU724_004805 CDS
T07894
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pie03016
]
HU724_004805 (truB)
Enzymes [BR:
pie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HU724_004805 (truB)
Transfer RNA biogenesis [BR:
pie03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU724_004805 (truB)
Prokaryotic type
HU724_004805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXI23595
LinkDB
All DBs
Position
1099316..1100233
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagcca
ttggggttcacctccaacgctgccttgcagaaggtgcgctggctgctcaatgccgagaag
gccgggcacaccggcagcctcgacccgttggccaccggcgtgttgccgctgtgcttcggc
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggctacgagaccctggcg
caactgggcaagaccaccaccacggccgatgccgaaggcgaggttttgcaggagcgtccg
gtgaccgttggtcgcgccgatgtcgaagcggttctgccgaaatttcgcgggcaaatcagt
cagataccgccgatgtactcggcactcaagcgtgatggccagccgctgtacaaactggca
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgaaggcgatactgcgcggcttgcggtggactgcagcaaaggcacctatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgcagaactg
cgtcggacccaggccgggcctttcaccctggcgcagaccgtgaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggatagt
ggcctgcaagattggccgctgctgcacttctcggaagcgagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgcgccgaagttcggcatggtgcgagtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgc
ttgattcggtcagaatga
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