Pseudomonas iranensis: HU724_004815
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Entry
HU724_004815 CDS
T07894
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pie
Pseudomonas iranensis
Pathway
pie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU724_004815 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pie03019
]
HU724_004815 (pnp)
03016 Transfer RNA biogenesis [BR:
pie03016
]
HU724_004815 (pnp)
Enzymes [BR:
pie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HU724_004815 (pnp)
Messenger RNA biogenesis [BR:
pie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HU724_004815 (pnp)
Transfer RNA biogenesis [BR:
pie03016
]
Prokaryotic type
tRNA degradation factors
HU724_004815 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
TraK_C
S1_2
Motif
Other DBs
NCBI-ProteinID:
QXI23597
LinkDB
All DBs
Position
1100851..1102956
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWNWAPAPEA
TELLGAIRAEFGEAISQAYTITIKADRYARLGELKDQVVAKLSGEEGQPSAAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgaccgttaccctcgagacaggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgttgtcggtgcaaagcaagccgatccgggcaagggcttcttccctctgtcc
gttcattaccaggaaaagacttacgctgccggtaagattcctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggcattccgttcgacggcccgatcggcgccgctcgcgtggctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtgctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtattgttcgctcacgacgaattccaggttgtgatcaacgctgtt
aaagaactggctgccgaagccgccaagccaacctggaactgggctcctgcgccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccatcaaagccgaccgttacgctcgcctgggtgagctgaaggaccaggtggttgcc
aagctgtccggtgaagaaggccagccaagcgctgctgaagtcaaagccgccttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacaccaagactgtacgtccgctgaacatcgaagtcggcgttctgccaaagactcacggt
tcggcactgttcacccgtggcgaaacccaggcgctggttgtggcaacactgggcaccgcc
cgtgacgcgcaactgctggacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttcccgccgttctcggtaggcgagtgtggtcgcatgggtggcgccggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgcgtggtgtcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtgtgcggtgcttccctggcactgatggacgctggtgtaccgatgaaagca
ccggtggccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatcctcggcgacgaagatcacctcggcgacatggactttaaggtagccggtaccgcc
aaaggcgttaccgcactgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaggcccttgaggcgcgcctgaacatcctcggtcagatgaaccag
atcattggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaagcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggatgccgcagaagctgctcgtcagcgcgttctgagcatcactgcagaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgttgacttcggcgcattcgta
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtcaccgacattctgaaagaaggtcaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagctgccaaggcttcgggc
gtttaa
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