Pseudomonas iranensis: HU724_006055
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Entry
HU724_006055 CDS
T07894
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pie
Pseudomonas iranensis
Pathway
pie03410
Base excision repair
pie03430
Mismatch repair
pie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU724_006055 (recJ)
03430 Mismatch repair
HU724_006055 (recJ)
03440 Homologous recombination
HU724_006055 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pie03400
]
HU724_006055 (recJ)
DNA repair and recombination proteins [BR:
pie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HU724_006055 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HU724_006055 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HU724_006055 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXI23840
LinkDB
All DBs
Position
1385122..1386831
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRQLPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKRAGLKVLITDHHLPGDELPQADALVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYESKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREAARITSTDLGFIVGPRLNAAGRLDDMSLGIEC
LLTADANLAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPNLIAKYGG
HAMAAGLTLPQENFPLFAEAFDAEVRRQLREEDLTGRMLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDVWPNPTIQ
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgtcaactgcctgccacgctgcctttcctcggtgatctgccgcca
ctgctgacccgcctgtacgcggcgcggggtgtgcaatcggaagcggagctggacaaaagt
ctggcgcgcttgatcccgttccagcagctcaaaggcattgatgcggcggttgacctgctg
gtgacggcattggagcaacgccagcgcattttgatcgtcggcgacttcgatgcggacggc
gccaccgccagcactgtcggtgtgctcggtctgcgcctgctgggcgcggcgcatgtcgat
tatctggtgccgaaccgttttgaatacggctatggcctgacaccggaaatcgtcgaagtc
gcactgacccgtgaaccgcaactattgatcaccgtcgataacggcatctccagcgtcgaa
ggcgtcgcggcggccaagcgcgccggactgaaggtgttgatcaccgaccaccacttgccc
ggcgatgaactgccgcaggccgatgcgctggtcaatccgaaccagccgggctgcgagttt
ccgagcaaggcgctggccggcgtcggggtgattttctacgtgttgatggctctgcgcgcg
cgactgcgcagcctcggctggtacgagagcaaaccgcaaccgaacattggcgaactgctc
gatctggtggcgctgggcagcgtcgccgatgtggtgccgctggatgccaacaaccgcatt
cttgtgcatcaagggctggagcggattcgcgccggccgggcacggccggggatcaaggcg
atcctcgaagtcgccaagcgagaggctgcgcggatcacttccaccgacttgggttttatt
gtcggcccgcgcctgaacgccgccgggcgtctggacgacatgagcctgggcatcgaatgc
ctgctcaccgccgacgccaatctggcgcgggaaatggctgcgcaactggacggcatgaac
caggatcgcaaatccatcgagcagggcatgcagcgtgaagcgctggcgcagctcaaggat
ctgccggtcgaatcgatgccgttcggtctgtgcctgttcgatccggagtggcatcagggc
gtgatcggcatcctcgcctcgcgcatgaaagagcgctatttccgcccgaccattgctttc
gccgatgccggtgatggcttgctcaagggctccgggcgttccgtgcaaggcttccatatt
cgtgatgcgctgagcgtggtcgcagcgcagcatccgaacctgatcgccaagtacggtggc
cacgcgatggcggccggtctgaccttgccgcaggagaattttccgctgttcgccgaggca
ttcgacgctgaggtgcgtaggcaacttcgcgaagaagacctcaccgggcgcatgttgtcc
gatggcacgctggccgtcgaagaattccacctcgaactggcccgcgccttgcgccatgcc
gggccatggggtcagcactttccggagccgctgtttcacggtgtgtttcaactggtcgag
cagcgcgtggttggcgaacggcatttgaaagtggtgctgaaaagcgaatgtggctcggtg
aagctcgatggcatcgcgtttggtattgatcgcgatgtgtggccgaacccgacgattcaa
tgggttgaactggcttacaagctcgacgtcaacgagtttcgtggcaacgagactgtgcag
ttgatgattgctcatatcgaaccgcgttaa
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