Pseudomonas iranensis: HU724_006285
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Entry
HU724_006285 CDS
T07894
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00300
Lysine biosynthesis
pie01100
Metabolic pathways
pie01120
Microbial metabolism in diverse environments
pie01230
Biosynthesis of amino acids
Module
pie_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU724_006285 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pie01002
]
HU724_006285 (dapE)
Enzymes [BR:
pie01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HU724_006285 (dapE)
Peptidases and inhibitors [BR:
pie01002
]
Metallo peptidases
Family M20
HU724_006285 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
QXI23883
LinkDB
All DBs
Position
complement(1442354..1443505)
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFTLEPMRIEDVDNFWATH
GNNDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLVARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVKGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctatcgccgacccttcaactggccatcgacctgatccgccgt
ccttccgtgaccccggtcgatgccgactgccagaagcagatgatgcagcgcctgggcgat
gccggtttcaccctggagccgatgcgcatcgaagatgtggataacttctgggccactcac
ggcaacaacgacggcccggtgctgtgcttcgccggccacaccgacgtggtgccgaccggt
ccggttaccgcatggcagatcgatccgttcaatgccgtgatcgacgaacatggcatgctc
tgcggccgtggcgcggcagacatgaaaggcagcctggcatcgatgacagtcgccgctgaa
cgcttcgtcgccgactatccgaatcacaagggcaaggtcgctttcctgatcaccagcgat
gaagaaggcccggcgcatcacggcaccaaggcagtggtcgagcgtctggtcgcgcgcaac
gagcgtctggactggtgcatcgttggcgagccgtcgagcaccacgctggtcggcgatgtg
gtgaaaaacggccgtcgcggctccctcggcgccaagctgacggtcaaaggcgtgcagggc
cacgtggcctatccgcatctggcgaagaacccgatccacctcgccgctccggcgctggca
gagctggccgccgagcactgggaccacggcaacgatttcttcccgccgaccagtttccag
atttccaacctcaattccggcaccggcgcgaccaacgtgatcccgggtgatctggtggcg
gtgttcaacttccgtttctccaccgaatcgaccgtcgaaggcctgcagaaacgcgttgcc
gatattctcgacaagcatggcctggactggcacatcgactgggcgctgtccggcctgcca
ttcctcaccgaaccgggcgcgctgctcgatgcggtgtcgtcgagcatcaaggacatcacc
ggtcgcgaaaccaaggcatcgaccagcggcggcacctccgatggccgcttcatcgcgacc
atgggcacgcaagtggttgaactgggcccggtcaacgcgaccatccaccaggtcaacgag
cgcgtgctggcagccgatctcgacgtgctgacggaaatctattaccagaccctgatcaag
ttgctcgcctga
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