Pseudomonas iranensis: HU724_006420
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Entry
HU724_006420 CDS
T07894
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pie
Pseudomonas iranensis
Pathway
pie03030
DNA replication
pie03430
Mismatch repair
pie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU724_006420 (dnaE)
03430 Mismatch repair
HU724_006420 (dnaE)
03440 Homologous recombination
HU724_006420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pie03032
]
HU724_006420 (dnaE)
03400 DNA repair and recombination proteins [BR:
pie03400
]
HU724_006420 (dnaE)
Enzymes [BR:
pie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU724_006420 (dnaE)
DNA replication proteins [BR:
pie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU724_006420 (dnaE)
DNA repair and recombination proteins [BR:
pie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU724_006420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXI23908
LinkDB
All DBs
Position
1473584..1477105
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTAMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLANKDPDAPLSRLSLLVMNAQGYRNLTELISRGFIEGQRNGMVIVEREWV
AEANEGLIMLSAAKEGEIGMAMIGGNPAEAEALAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMLELFSDIPDAIENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFEGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYDGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYASHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLHTQDLKGDQLRWLGELLKRHRGACPVTMEYTSPDAKTL
LQFGETWRIDPADTLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcggatcaagccgctggtcaaggcgctgaccgccatgaacatgccggcggtcgcggtc
accgaccagaacaacatgtgttccctggtcaagttctataaaaacgcaatgggcgccggc
atcaagccgatttgcggcgccgacctgtggctggcgaacaaggacccggatgcacccctg
agccgcctcagcctgctggtgatgaacgctcagggttatcgcaatctcaccgaactgatc
tcgcggggcttcattgaaggccagcgcaacggcatggtcatcgtcgagcgcgagtgggtg
gccgaggccaacgaaggcctgatcatgctgtccgccgccaaagaaggcgagatcggcatg
gccatgatcggcggcaacccggcggaagccgaagcgctggcacgcgagtggatggcggtg
ttcccggatcgtttctatctggaaatccagcgcaccaaccgccccaacgatgaagagcaa
ctgcacggcgccgtggcgctggccgacaagcttggcgcgccgctggtggcgaccaacgat
gtgcgcttcatcaagcaggaagacttcgccgcccacgaaacccgtgtgtgcatcggtgaa
ggccgcgccctcgatgacccgcgtcgttcgaagaattacagcgatcagcaatacctgaag
agcgccgaggaaatgctcgagctgttcagcgatattcccgacgccatcgaaaacaccgtc
gagatcgccaagcgctgcaacatcgaagtgaagctgggcacgcacttcctccccaacttc
ccgatccccgatggcatgaccatcgacgaatatttccgcaaggtctccttcgaagggctc
gaagaacgcctggcggtgctgctgcccaaggacaccaccgaagactacgaagccaagcgc
caggtctacgtcgaccgcttgaatttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaataacggcgtaccggta
ggtccgggccgtgggtcaggtgccggatcgctggtggcttacgtacagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgtttccttaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggccgtgaccgggtgatcgattacgtg
gccgagaaatacggccgcaacgcggtgagccagatcatcaccttcggttccatggccgcc
aaggctgtggtccgtgacgtggcgcgggtgcagggcaagtcctatggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgactctggaaaaagcctacgagcaggaa
gagatcctgcgcgacttcatcaaggtcgatgaagaagcggcggaaatctgggagatggcg
cgcaagctcgagggcgtggtgcgtaacgtcggcaaacacgccggtggcgtggtgatcgcg
ccgaccaagctgaccgacttctcgccgatctattgcgacgaggccggtgacggtctggta
acccagttcgacaaggatgacgttgaggccgccggtctggtgaagttcgacttcctcggc
ctgcggaccctgacgatcatcgactgggcgctgaaaaccatcaaccgcgatcgcgccaag
gtcaacgagccgccgctggatatcgcttttattccgctggacgacaagccgacctaccag
ttgctgcaaaaagccgaaaccacggcggtgttccagcttgaatcccgaggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggcactgttc
cgtcccggtccgctgcaatcgggcatggtggacgacttcatcaaccgtaagcacggtcgc
gccgaactggcgtatccgcactcggactaccagtacgacgggctcaagccggtattggcg
ccgacttacggcatcatcctgtatcaggaacaggtgatgcagattgctcaggtcatggcc
ggttacaccctcggcggtgcggacatgctgcgtcgggcgatgggtaagaaaaagcccgaa
gaaatggccaagcagcgcggcggtttcattgagggttgcgcgaccaacgggatcgacgcg
gatcttgccggtaacattttcgacctggtggagaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcttggctgaaagctcactac
ccggcgccgttcatggccgcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcggacgatgaagctgcgcctcgacgcgccagacgtgaacact
tcggagttcaagttcacggtgaacgacgacggccgcatcgtttacggcctcggcgcgatc
aaaggcgttggtgaaggtccggttgaagcgatcactgaagcgcgacaggccggtccgttc
aaggatctgttcgatttctgcgcgcgggtcgacctcaagcgcatcaacaaacgaactctt
gatggcttgattcgcagcggcgcgctggatcgtcttggtccgtatttccacgatgaacaa
aaggcctatcaagccaacatcgaccgcaaccgtgcggtactgctggcggcgatggaagag
gcgatcaaggctgccgagcagactgcgcggacccacgactctggccacgccgacctgttt
ggcggcttgttcgtcgaagaagatgccgacgtctacgcgtcccatcgcaaggccaaggaa
ctgaccctcaaggaacgcctcaagggtgagaaagacaccttgggcctgtacctgaccggt
cacccgatcgacgaatacgaaggcgagatccgccgtttcgcccgccagcgcatcatcgac
ctgaaaccggcgcgcgatacgcaaaccgtagcggggatgatcattgccctgcgggtgatg
aagaacaagaagggcgacaagatgggtttcatcaccctcgacgaccgctccgggcggatc
gaagcgtcgctgtttgccgatgcgttccattcggcgcaatcgctgctgcagaccgacgcg
atggtggtggttgaaggcgaggtcagcaatgacgacttctccggcggcctgcgcctgcgg
gtcaagcgggtgatgagcatggaggatgcgcggaccaatctggccgaaagcctgcgcttg
aagctgcacacccaggatctcaaaggcgatcagctacgctggttgggcgaactgctcaag
cgtcatcgcggcgcgtgcccggtgaccatggagtacaccagcccggatgcgaagaccttg
ctgcagttcggcgagacctggcggatcgacccggcggataccttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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integrated database retrieval system
