Pseudomonas iranensis: HU724_007070
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Entry
HU724_007070 CDS
T07894
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pie03021
]
HU724_007070 (rapA)
Transcription machinery [BR:
pie03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU724_007070 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXI24031
LinkDB
All DBs
Position
complement(1607687..1610533)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQQVDDVDGLMVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDNYRPVAEAVQELLDK
GRLSAEAHKTIHGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGEHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QQRLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGEWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSPRVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPRHAERVAEARRRLAADTDEEL
ARLTALQAVNPTVRDSELEALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcagagcttggt
ttaggcaccgttctggcacaggacggccgcttgctgaccgtgctttacccggccactggc
gaaacccgccagtacgcgctacggaatgcgcccctgacccgcgtgcggttttcgccgggc
gactccatcacccatttcgaaggctggaagatgaccgtgcagcaggtcgacgacgtcgac
gggctgatggtctatcacggcctcaacgggcagaacgaggtcgtcacgctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgcctgttcgccggacagatc
gacccgctgccgtggttctccctgcgctacaacactcttgaacacaccagccgccagttg
cagtcctcgctgtggggcttgggtggcgtgcgtgcgcaaccgatcgcgcaccagttgcac
atcgcccgcgaagtcgccgaccgtatcgccccgcgtgtattgctggcggacgaagtgggt
ctgggtaagaccatcgaagccggtctggtcatccaccgccagctgctctcgggccgcgcc
aatcgcgtgctgattctggtcccggaaaacctccagcatcagtggctggtggagatgcgc
cgccgtttcaatctgcaggtcgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
accaacccgttcgaagacacgcaactggcgctggtcgcgctggagtggctggtcgacgac
gagaaggcacaggacgccttgttcgccgctggttgggacctgatggtggtcgacgaagcg
caccacctggtctggcatgaagacaaggccagcgcggaatactcgctggtcgagcaactg
gccgaagtgattcccggcgtgctgctgctcaccgccaccccggaacaactcggtcaggac
agccacttcgcccgtctgcgcctgcttgacccgaatcgtttccacgacctggccgcgttc
cgcgccgagagcgacaactatcgccctgtggccgaagcggtgcaggaactgctcgacaag
ggccgtctctccgccgaggcgcacaagaccattcacggtttcctcggcaatgaaggcgaa
gccctgctcaccgccgtcaacgatggcgatactgaagccagcgcccgcctcgtccgtgaa
ctgcttgatcgccacggcaccggccgcgtgctgttccgcaacacccgcgccgctgtgcag
ggtttcccggagcgaaaactgcatccatacccgctgccgtgcccggacgaatacctcgaa
ctgccgctgggcgaacacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagagcgctggtggaaattcgacccgcgcgtcgagtggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgcgttgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagaattcggcgcg
caggtgctgatctgctcggagatcggcagtgagggtcgcaacttccagttcgctcaccac
ctggtgctgttcgatctgccgtcgcacccggacctgctcgaacagcgcatcggccgtctt
gaccggatcggccagaagcacatcatcgaactgcacgtgccatacctggaaaccagcccg
caacagcgcctgttccagtggtaccacgaagcgctcaacgccttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggcccacgcctgctgccgctgctcgaagaagcc
gatgacggcgagtggcaagcgctgatcgacgaagcacgggccgagcgtgagcgtctcgaa
gccgagctgcacaccggccgcgaccgtttgctggaattgaattccggcggcgctggcgaa
ggtgaagcgctggtagaagcgatcctcgagcaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgctctg
atcctcaagccgagcgagaagatgctcgacgccagtttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaatcaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacaccctatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgccgtcgcgctgatcaagaacaaggcgctgaagccgggcaccgtgttgctggaattg
ctgtacgtcagcgaagtggtcgcaccgcgctcgctgcaactgggtcgctacctgccaccg
gcggcgctgcgttgcctgctcgatgccaatggtaatgacctgtcgccacgggtgtcgttc
gaaaccctcaacgatcagctggaaagcgtgccacgggccagcgccaacaagttcatccag
gcccagcgcgatcaattgacgccacggatcaacgccggcgaagaaaagatcgccccgcgt
cacgccgagcgtgtggccgaagcgcgccgtcgtctggccgccgacactgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgtgacagcgaactggaggcg
ttgcgcactcagcgtgagcagggtctggcaatgctcgacaaagcggcgttgcgcctggaa
gcgattcgggtgctggtggcgggttaa
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