Pseudomonas iranensis: HU724_007665
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Entry
HU724_007665 CDS
T07894
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pie03016
]
HU724_007665 (rnd)
Enzymes [BR:
pie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HU724_007665 (rnd)
Transfer RNA biogenesis [BR:
pie03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HU724_007665 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QXI24143
LinkDB
All DBs
Position
1736575..1737708
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AA seq
377 aa
AA seq
DB search
MAIDIHWIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPL
TINAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVELRPKLSADKFAWV
LEDGAELVANLRRETDPYEVYREAKLAWKLSRAQLAVLRELCAWREKEARARDLPRNRIV
REHSLWPLARTQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRSGSVGPDQWPPAVPEPL
PIEAAALIKQLRALGQAEAERLGIAPELMLRKKTLEALVKSGFPEGPYQLPDSLRGWRRE
LLGQKLLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggctatcgatattcactggattcgcgacaacgaaagcctcgcgcagttttgcgccgag
tggcagcagctgccgttcgttgccctcgacaccgaattcatgcgggtcgacaccttctac
ccgattgccggcctgttgcagatcggcgacggcaaacgcgcctacctgatcgacccgctt
accatcaacgcctggcaaccgctggccgcgttgctggagaacccggcggtgctgaaagtc
ctgcacgcctgcagcgaagacctcgaagtgctgttgcgcctgaccggcagcctgccggcg
ccgttgttcgacacgcaactggccgccgcttacctgaacctcggcttctcgatgggctat
tcgcgtctggtgcaggaagtgctcggcatcgacctgcccaagggcgaaacccgctccgac
tggttgcagcgcccgctgtccgatacccagatcagctatgccgccgaagacgccgtgcat
ctggctgaggtgttcgtcgagttgcggcccaagctgtccgccgacaagttcgcctgggtg
ctggaggatggcgccgaactggttgccaacctgcgccgcgagaccgatccgtacgaggtc
tatcgcgaggcgaaactggcgtggaagctgtcccgagcgcaactcgccgtgctgcgtgaa
ctgtgcgcctggcgcgaaaaagaagcccgcgcccgcgacctgccgcgcaaccgcatcgtc
cgggaacactcgctgtggcccctggcccgcacgcagccggataacctcgcggcgctgggc
aagatcgaagacatgcacccgcgtaccgtacgtcaggacgggcagtttctgcttgatctg
atcaagcgctctggcagtgtggggccggatcaatggccgccggcagtgcccgagccgttg
ccgatcgaagccgctgcgttgatcaaacaactgcgcgcgctgggtcaggccgaggccgaa
cgcctgggtattgccccggaactgatgctgcgcaagaaaaccctcgaagccctggtcaaa
agcggcttccccgagggtccttaccaattgcccgattcgctgcgtggctggcgccgcgaa
ttgctcggccagaagctgctcgacagcctggccaccgccggagaacagccttga
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